RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 GPC2Q8N158 579 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 BEST2Q8NFU1 509 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 ZNF398Q8TD17 642 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 MIPEPQ99797 713 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 DHRS4Q9BTZ2 278 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 DCLRE1BQ9H816 532 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
TTC3-209ENST00000438055 SLC5A4Q9NY91 659 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 KANSL3Q9P2N6 904 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 TTLL3Q9Y4R7 772 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 NUMBLQ9Y6R0 609 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 RPL10AP62906 217 aaKnown RBP17.32■□□□□ 0.36
TTC3-209ENST00000438055 DCAF6Q58WW2 860 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 CAND1Q86VP6 1230 aaKnown RBP17.32■□□□□ 0.36
TTC3-209ENST00000438055 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 PYROXD2Q8N2H3 581 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 TEX9Q8N6V9 391 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 GSDMBQ8TAX9 411 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 MZB1Q8WU39 189 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 DNAJC9Q8WXX5 260 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 THTPAQ9BU02 230 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 CXCL16Q9H2A7 254 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 POPDC2Q9HBU9 364 aa17.32■□□□□ 0.36
TTC3-209ENST00000438055 GABRB2P47870 512 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 SLC8A3P57103 927 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 WASHC2DQ5SRD0 308 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
TTC3-209ENST00000438055 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 WWP1Q9H0M0 922 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 EVPLQ92817 2033 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 MYO18AQ92614 2054 aaKnown RBP17.31■□□□□ 0.36
TTC3-209ENST00000438055 GSC2O15499 205 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 HNRNPCL1O60812 293 aaKnown RBP17.31■□□□□ 0.36
TTC3-209ENST00000438055 SAT1P21673 171 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 HDAC4P56524 1084 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 PRKD1Q15139 912 aaPredicted RBP17.31■□□□□ 0.36
TTC3-209ENST00000438055 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 RINLQ6ZS11 566 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 TTC39CQ8N584 583 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 PGBD4Q96DM1 585 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 OSMRQ99650 979 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 PLLPQ9Y342 182 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 MFHAS1Q9Y4C4 1052 aa17.31■□□□□ 0.36
TTC3-209ENST00000438055 SLC15A5A6NIM6 579 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TSPAN1O60635 241 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TSHRP16473 764 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 GOT1P17174 413 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 KCNA4P22459 653 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 NEK3P51956 506 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TAZQ16635 292 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 KCNN1Q92952 543 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TBCBQ99426 244 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 MED10Q9BTT4 135 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 SPECC1L-ADORA2AF8WAN1 911 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 IL4RP24394 825 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 SULT1E1P49888 294 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 OLFML1Q6UWY5 402 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 AGR3Q8TD06 166 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TTC1Q99614 292 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
TTC3-209ENST00000438055 PHACTR1Q9C0D0 580 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 BATF3Q9NR55 127 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 C2CD2Q9Y426 696 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 NVLO15381 856 aaKnown RBP17.3■□□□□ 0.36
TTC3-209ENST00000438055 WFS1O76024 890 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 GNL1P36915 607 aaPredicted RBP17.3■□□□□ 0.36
TTC3-209ENST00000438055 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
TTC3-209ENST00000438055 YIPF3Q9GZM5 350 aa17.3■□□□□ 0.36
TTC3-209ENST00000438055 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.3■□□□□ 0.36
TTC3-209ENST00000438055 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 LMNAP02545 664 aaKnown RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 GRIK4Q16099 956 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 CCDC142Q17RM4 750 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 CCDC185Q8N715 623 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 SLC2A14Q8TDB8 520 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 TFB1MQ8WVM0 346 aaKnown RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 CNMDO75829 334 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 DLDP09622 509 aaKnown RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 ETV4P43268 484 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 SLC18A2Q05940 514 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 MTHFD1LQ6UB35 978 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 WDR75Q8IWA0 830 aaKnown RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 HIPK4Q8NE63 616 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 ZNF670Q9BS34 389 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 LYPLA1O75608 230 aaPredicted RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 TYK2P29597 1187 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 CFAP157Q5JU67 520 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 SNX30Q5VWJ9 437 aa17.29■□□□□ 0.36
TTC3-209ENST00000438055 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
TTC3-209ENST00000438055 RSPH3Q86UC2 560 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms