RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 KPNA7A9QM74 516 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 SLC10A3P09131 477 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 PNPLA4P41247 253 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 GBE1Q04446 702 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 MORN1Q5T089 497 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 ZNF534Q76KX8 674 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 LIMS2Q7Z4I7 341 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 CEP57Q86XR8 500 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 APBB2Q92870 758 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 HSFY1Q96LI6 401 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 CSPG4P5Q96PW8 444 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 RAB3IPQ96QF0 476 aaPredicted RBP19.26■□□□□ 0.67
CLK1-205ENST00000434813 KCTD15Q96SI1 283 aaPredicted RBP19.26■□□□□ 0.67
CLK1-205ENST00000434813 TSPAN18Q96SJ8 248 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 NPHS2Q9NP85 383 aa19.26■□□□□ 0.67
CLK1-205ENST00000434813 CYP2C9P11712 490 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 ATXN1P54253 815 aaKnown RBP19.25■□□□□ 0.67
CLK1-205ENST00000434813 FAM182AQ5T1J6 154 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 NLRP9Q7RTR0 991 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 INPP5DQ92835 1189 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 DNAI2Q9GZS0 605 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 SMIM28A0A1B0GU29 152 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 SPTLC1O15269 473 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 XPOTO43592 962 aaKnown RBP19.25■□□□□ 0.67
CLK1-205ENST00000434813 KRT37O76014 449 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 PDGFRBP09619 1106 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 PYGBP11216 843 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 LCP1P13796 627 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 EZRP15311 586 aaKnown RBP19.25■□□□□ 0.67
CLK1-205ENST00000434813 AKAP5P24588 427 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
CLK1-205ENST00000434813 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 SLC10A2Q12908 348 aaPredicted RBP19.25■□□□□ 0.67
CLK1-205ENST00000434813 PARP6Q2NL67 630 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 XKR4Q5GH76 650 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 STRADAQ7RTN6 431 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 CCDC91Q7Z6B0 441 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 PPM1NQ8N819 430 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 APOL6Q9BWW8 343 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 SNX25Q9H3E2 840 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 ZFYVE28Q9HCC9 887 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 USP3Q9Y6I4 520 aa19.25■□□□□ 0.67
CLK1-205ENST00000434813 TRIM49D1C9J1S8 452 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 METTL18O95568 372 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 IL1BP01584 269 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 APOEP02649 317 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 SNRPAP09012 282 aaKnown RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 KCNE1P15382 129 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 LMO2P25791 158 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 TARSP26639 723 aaKnown RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 SEMA5AQ13591 1074 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 PLEKHG4Q58EX7 1191 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 NCBP2-AS2Q69YL0 99 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 C17orf99Q6UX52 265 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 CTAGE3PQ8IX95 158 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 CCDC185Q8N715 623 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 SLC2A14Q8TDB8 520 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 FAM111AQ96PZ2 611 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 TSSK1BQ9BXA7 367 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 MKS1Q9NXB0 559 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLK1-205ENST00000434813 RCOR3Q9P2K3 495 aaPredicted RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 CXorf49A8MYA2 514 aaPredicted RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 CCNFP41002 786 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 TAF6P49848 677 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 KCNT2Q6UVM3 1135 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 UNC5AQ6ZN44 842 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 APPL2Q8NEU8 664 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 LRRN4Q8WUT4 740 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 OLFM3Q96PB7 478 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 TMEM237Q96Q45 408 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 TACO1Q9BSH4 297 aaKnown RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 XAB2Q9HCS7 855 aaKnown RBP19.24■□□□□ 0.67
CLK1-205ENST00000434813 RNF19AQ9NV58 838 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 DTLQ9NZJ0 730 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 KANSL3Q9P2N6 904 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 STK38LQ9Y2H1 464 aa19.24■□□□□ 0.67
CLK1-205ENST00000434813 COPEO14579 308 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 XPO1O14980 1071 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 TGDSO95455 350 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 SNX17Q15036 470 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 PRKD1Q15139 912 aaPredicted RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 E2F5Q15329 346 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 SV2CQ496J9 727 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 EFHC1Q5JVL4 640 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 LGSNQ5TDP6 509 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 HEATR6Q6AI08 1181 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 GSDMBQ8TAX9 411 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 AGAP11Q8TF27 550 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 TMEM40Q8WWA1 233 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 UTP4Q969X6 686 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 SIGLEC10Q96LC7 697 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 SRPK1Q96SB4 655 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 EBNA1BP2Q99848 306 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 TRIM55Q9BYV6 548 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 SMYD2Q9NRG4 433 aa19.23■□□□□ 0.67
CLK1-205ENST00000434813 ABT1Q9ULW3 272 aaKnown RBP19.23■□□□□ 0.67
CLK1-205ENST00000434813 GNEQ9Y223 722 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms