RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 WDR6Q9NNW5 1121 aaKnown RBP24.2■■□□□ 1.46
SMARCAL1-208ENST00000434435 DDIT4Q9NX09 232 aa24.2■■□□□ 1.46
SMARCAL1-208ENST00000434435 MARCH2Q9P0N8 246 aa24.2■■□□□ 1.46
SMARCAL1-208ENST00000434435 DNMT3LQ9UJW3 386 aa24.2■■□□□ 1.46
SMARCAL1-208ENST00000434435 USTQ9Y2C2 406 aa24.2■■□□□ 1.46
SMARCAL1-208ENST00000434435 TRAV19A0A0A6YYK7 116 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 SOBPA7XYQ1 873 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 MDM4O15151 490 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 IRAK2O43187 625 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 F9P00740 461 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 IGLV3-25P01717 112 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 FSHRP23945 695 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 RDXP35241 583 aaKnown RBP24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 MTHFRP42898 656 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLC1A1P43005 524 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 SKIV2LQ15477 1246 aaKnown RBP24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 GPR158Q5T848 1215 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 MAB21L3Q8N8X9 362 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 LRRC57Q8N9N7 239 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 CENPIQ92674 756 aaPredicted RBP24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 IRX2Q9BZI1 471 aaPredicted RBP24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 TMEM51Q9NW97 253 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 SFMBT1Q9UHJ3 866 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 CD207Q9UJ71 328 aa24.19■■□□□ 1.46
SMARCAL1-208ENST00000434435 SYNJ2BP-COX16A0A087WUM0 186 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 NRG2O14511 850 aaPredicted RBP24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 OLFM2O95897 454 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 TBX18O95935 607 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 CEBPBP17676 345 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 NME3Q13232 169 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 NNTQ13423 1086 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 SH3PXD2AQ5TCZ1 1133 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 SND1Q7KZF4 910 aaKnown RBP eCLIP24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 BNIPLQ7Z465 357 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 ITFG1Q8TB96 612 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 ING5Q8WYH8 240 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 ADAM33Q9BZ11 813 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 GOLPH3Q9H4A6 298 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLITRK6Q9H5Y7 841 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 TASP1Q9H6P5 420 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 COX16Q9P0S2 106 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 ALG6Q9Y672 507 aa24.18■■□□□ 1.46
SMARCAL1-208ENST00000434435 MSI1O43347 362 aaKnown RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 SPOPO43791 374 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 LRCH4O75427 683 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 ENDOD1O94919 500 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 MBL2P11226 248 aaPredicted RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 HDCP19113 662 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 COMTP21964 271 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 PCK1P35558 622 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 SSR1P43307 286 aaKnown RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 HDAC4P56524 1084 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 ZNF569Q5MCW4 686 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 STXBP5Q5T5C0 1151 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 CC2D1AQ6P1N0 951 aaPredicted RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLFN11Q7Z7L1 901 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 MIB1Q86YT6 1006 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 ARL14EPQ8N8R7 260 aaPredicted RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 SMRP1Q8NCR6 262 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 PPM1EQ8WY54 764 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 UBE2ZQ9H832 354 aaPredicted RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 CDH22Q9UJ99 828 aa24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 HBS1LQ9Y450 684 aaKnown RBP24.17■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLC12A8A0AV02 714 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 CKMP06732 381 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 KPNA1P52294 538 aaPredicted RBP24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 TRIP4Q15650 581 aaPredicted RBP24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 CLUL1Q15846 466 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 GET4Q7L5D6 327 aaPredicted RBP24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 PEX26Q7Z412 305 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 NECTIN4Q96NY8 510 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 RNF38Q9H0F5 515 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 PIGVQ9NUD9 493 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 CALCOCO1Q9P1Z2 691 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 AMFRQ9UKV5 643 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 TLR6Q9Y2C9 796 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 HYOU1Q9Y4L1 999 aa24.16■■□□□ 1.46
SMARCAL1-208ENST00000434435 MIPP30301 263 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 ATXN1P54253 815 aaKnown RBP24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 TBX4P57082 545 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLC7A9P82251 487 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 EIF4EBP2Q13542 120 aaPredicted RBP24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 HADHQ16836 314 aaKnown RBP24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 RAB6CQ53S08 254 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 DAB2IPQ5VWQ8 1189 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 SCYL2Q6P3W7 929 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 CPNE8Q86YQ8 564 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLC22A12Q96S37 553 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 SLC46A2Q9BY10 475 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 RAB6CQ9H0N0 254 aa24.15■■□□□ 1.46
SMARCAL1-208ENST00000434435 PRPSAP2O60256 369 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 FTCDO95954 541 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 AVPR1AP37288 418 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 CXCR3P49682 368 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 GNG11P61952 73 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 COG7P83436 770 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 BRMS1LQ5PSV4 323 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 NT5DC3Q86UY8 548 aa24.14■■□□□ 1.45
SMARCAL1-208ENST00000434435 FAM131BQ86XD5 332 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms