RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 GABBR2O75899 941 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 MATKP42679 507 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 FASTKD3Q14CZ7 662 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 C7orf61Q8IZ16 206 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SEPT8Q92599 483 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 RGS18Q9NS28 235 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SCN5AQ14524 2016 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 GOLGA6L7A0A1B0GV03 622 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ARL5CA6NH57 179 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 CYB561D2O14569 222 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ENPP3O14638 875 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 PTGESO14684 152 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 GABRDO14764 452 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 UPP2O95045 317 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ZBED1O96006 694 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 LCP1P13796 627 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 NPR3P17342 541 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SCNN1GP51170 649 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ITIH4Q14624 930 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 TMED2Q15363 201 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 QPCTQ16769 361 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 CCDC121Q6ZUS5 278 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SLC24A5Q71RS6 500 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 TMCO2Q7Z6W1 182 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 PIGWQ7Z7B1 504 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 TRABD2AQ86V40 505 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 CDKL3Q8IVW4 592 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 CCDC197Q8NCU1 140 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 PCDH19Q8TAB3 1148 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
CTCFL-209ENST00000433949 SMG5Q9UPR3 1016 aaKnown RBP12.39□□□□□ -0.43
CTCFL-209ENST00000433949 FAM47DPA6NHR8 397 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 TIMP1P01033 207 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 THP07101 528 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 VIMP08670 466 aaKnown RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 L1CAMP32004 1257 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 LHX1P48742 406 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 IFT88Q13099 833 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 SLC25A52Q3SY17 297 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 NPNTQ6UXI9 565 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PALM2Q8IXS6 379 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 CYP4X1Q8N118 509 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 ABHD8Q96I13 439 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 AP4E1Q9UPM8 1137 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 TSC2P49815 1807 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 C9IYK1 514 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 POC1B-GALNT4F8VUJ3 575 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 KCNN4O15554 427 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PRPF4O43172 522 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 DAB1O75553 588 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 ZNF189O75820 626 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 TMEM63AO94886 807 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 KRT15P19012 456 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 CYP2F1P24903 491 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 GCAP28676 217 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 STX2P32856 288 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 IFNAR2P48551 515 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PPARDQ03181 441 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 KCNJ11Q14654 390 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 RAB6CQ53S08 254 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 FAM117BQ6P1L5 589 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 C1orf228Q6PIY5 440 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 C3orf62Q6ZUJ4 267 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 PIGZQ86VD9 579 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 MAGEB18Q96M61 343 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 SMC6Q96SB8 1091 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 RAB6CQ9H0N0 254 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 DHX35Q9H5Z1 703 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms