RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SFMBT1Q9UHJ3 866 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 SYNJ2BP-COX16A0A087WUM0 186 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 FGF19O95750 216 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 TBX18O95935 607 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 TCP1P17987 556 aaKnown RBP27.56■■■□□ 2
TMEM248-205ENST00000433271 GABRR2P28476 465 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 RWDD2BP57060 319 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 BOLA3Q53S33 107 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 TXNRD3NBQ6F5E7 133 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 SND1Q7KZF4 910 aaKnown RBP eCLIP27.56■■■□□ 2
TMEM248-205ENST00000433271 LEMD2Q8NC56 503 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 PEBP4Q96S96 227 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 OSBPL9Q96SU4 736 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 PSMB7Q99436 277 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 COX16Q9P0S2 106 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 DNMT3BQ9UBC3 853 aaKnown RBP27.56■■■□□ 2
TMEM248-205ENST00000433271 SOX1O00570 391 aaPredicted RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 KCNK3O14649 394 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 POU3F3P20264 500 aaPredicted RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 CDC25CP30307 473 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 ATP5C1P36542 298 aaKnown RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 CYP4V2Q6ZWL3 525 aaPredicted RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 FAM131BQ86XD5 332 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 CMASQ8NFW8 434 aaPredicted RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 ZNF707Q96C28 371 aaPredicted RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 ZWILCHQ9H900 591 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 SFXN1Q9H9B4 322 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 WDR6Q9NNW5 1121 aaKnown RBP27.55■■■□□ 2
TMEM248-205ENST00000433271 HCFC1R1Q9NWW0 138 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 MARCH2Q9P0N8 246 aa27.55■■■□□ 2
TMEM248-205ENST00000433271 IRAK2O43187 625 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 URI1O94763 535 aaPredicted RBP27.54■■■□□ 2
TMEM248-205ENST00000433271 CXCR3P49682 368 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 EFEMP1Q12805 493 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 KATNAL2Q8IYT4 538 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 CARD9Q9H257 536 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 DDX56Q9NY93 547 aaKnown RBP27.54■■■□□ 2
TMEM248-205ENST00000433271 DNMT3LQ9UJW3 386 aa27.54■■■□□ 2
TMEM248-205ENST00000433271 OAS1P00973 400 aaKnown RBP27.53■■■□□ 2
TMEM248-205ENST00000433271 MYL4P12829 197 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 CXCR5P32302 372 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 NNTQ13423 1086 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 ATP13A4Q4VNC1 1196 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 TEKT4Q8WW24 435 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 MRPS31Q92665 395 aaKnown RBP27.53■■■□□ 2
TMEM248-205ENST00000433271 GCNAQ96QF7 691 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 TLR6Q9Y2C9 796 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 MTCH2Q9Y6C9 303 aa27.53■■■□□ 2
TMEM248-205ENST00000433271 COCHO43405 550 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 GLP2RO95838 553 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 RHOP08100 348 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 SRGAP2BP0DMP2 458 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 RARAP10276 462 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 GJC1P36383 396 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 SMTNL2Q2TAL5 461 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 KCNT1Q5JUK3 1230 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 ERMARDQ5T6L9 678 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 PBKQ96KB5 322 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 NACA2Q9H009 215 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 ATXN3LQ9H3M9 355 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 WDCPQ9H6R7 721 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 C2orf78A6NCI8 922 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 CES2O00748 559 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 MDM4O15151 490 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 MSI1O43347 362 aaKnown RBP27.52■■■□□ 2
TMEM248-205ENST00000433271 SRGAP2O75044 1071 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 KPNA1P52294 538 aaPredicted RBP27.52■■■□□ 2
TMEM248-205ENST00000433271 AIF1P55008 147 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 TUBB2AQ13885 445 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 DCAF12L1Q5VU92 463 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 PDZD4Q76G19 769 aaPredicted RBP27.52■■■□□ 2
TMEM248-205ENST00000433271 C12orf76Q8N812 135 aaPredicted RBP27.52■■■□□ 2
TMEM248-205ENST00000433271 NTAN1Q96AB6 310 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 TUBB2BQ9BVA1 445 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 RASAL2Q9UJF2 1139 aa27.52■■■□□ 2
TMEM248-205ENST00000433271 PRRC2BQ5JSZ5 2229 aaKnown RBP27.52■■■□□ 2
TMEM248-205ENST00000433271 A0A1W2PRU2 124 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 CCR1P32246 355 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 PPP2R5DQ14738 602 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 BRMS1LQ5PSV4 323 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 ZFYVE27Q5T4F4 411 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 GRASPQ7Z6J2 395 aaPredicted RBP27.51■■□□□ 1.99
TMEM248-205ENST00000433271 MIB1Q86YT6 1006 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 PSTKQ8IV42 348 aaKnown RBP27.51■■□□□ 1.99
TMEM248-205ENST00000433271 CCDC185Q8N715 623 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 EXD1Q8NHP7 514 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 COG1Q8WTW3 980 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 SMG7Q92540 1137 aaKnown RBP27.51■■□□□ 1.99
TMEM248-205ENST00000433271 RNF34Q969K3 372 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 RNF38Q9H0F5 515 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 PIDD1Q9HB75 910 aa27.51■■□□□ 1.99
TMEM248-205ENST00000433271 ANAPC1Q9H1A4 1944 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 LINC01565O15544 149 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 ZRANB2O95218 330 aaKnown RBP eCLIP27.5■■□□□ 1.99
TMEM248-205ENST00000433271 SLC2A3P11169 496 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 ADRA1BP35368 520 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 CCR2P41597 374 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 TBX4P57082 545 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 ADAM15Q13444 863 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 ADGRE1Q14246 886 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms