RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PKDCCQ504Y2 493 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 RAB41Q5JT25 222 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 BSPRYQ5W0U4 402 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 TXNDC11Q6PKC3 985 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 TPGS1Q6ZTW0 290 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 CCDC186Q7Z3E2 898 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NAT16Q8N8M0 369 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NEK11Q8NG66 645 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 RNF139Q8WU17 664 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 KCTD13Q8WZ19 329 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 SHC3Q92529 594 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 DNASE1L2Q92874 299 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 CHFRQ96EP1 664 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NAP1L5Q96NT1 182 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NELL2Q99435 816 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 OCSTAMPQ9BR26 566 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 NAA15Q9BXJ9 866 aaKnown RBP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 ECT2Q9H8V3 914 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 CBX8Q9HC52 389 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 LTB4R2Q9NPC1 389 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 TRPV5Q9NQA5 729 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 RBM12Q9NTZ6 932 aaKnown RBP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 TJP2Q9UDY2 1190 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 CYTH4Q9UIA0 394 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 DNMT3LQ9UJW3 386 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 ARHGAP26Q9UNA1 814 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 HCN4Q9Y3Q4 1203 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 MAP4K5Q9Y4K4 846 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 ATG2BQ96BY7 2078 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 COL4A2P08572 1712 aa6.05□□□□□ -1.44
HMGB3P24-201ENST00000433260 E2F8A0AVK6 867 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 ANTXRLA6NF34 631 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 GOLGA6L19H0YKK7 550 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CAPN9O14815 690 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 EPHB6O15197 1021 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 NCAM2O15394 837 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 GRAP2O75791 330 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 NFATC1O95644 943 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 OLFM2O95897 454 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 SETSIPP0DME0 302 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CYP11B1P15538 503 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 ZNF18P17022 549 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PFKLP17858 780 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 TARSP26639 723 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 DAOAP59103 153 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 RNASE9P60153 205 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 FOXC1Q12948 553 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 FZD5Q13467 585 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PDGFRLQ15198 375 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 TAF5Q15542 800 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 FILIP1LQ4L180 1135 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 C2CD6Q53TS8 623 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PM20D1Q6GTS8 502 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 OR6B2Q6IFH4 312 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 RHBDF2Q6PJF5 856 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 TSSK4Q6SA08 328 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 APTXQ7Z2E3 356 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CACNA2D4Q7Z3S7 1137 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PHLDB2Q86SQ0 1253 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 TADA2BQ86TJ2 420 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 NOP9Q86U38 636 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 RALGPS2Q86X27 583 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 DENND1CQ8IV53 801 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 BBS7Q8IWZ6 715 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CCDC105Q8IYK2 499 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 FAM71AQ8IYT1 594 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 ARHGAP18Q8N392 663 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CPA6Q8N4T0 437 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 DTWD2Q8NBA8 298 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 C1orf131Q8NDD1 294 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PRSS33Q8NF86 280 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PJA1Q8NG27 643 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CPLX3Q8WVH0 158 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 GOLGA1Q92805 767 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 ATOH1Q92858 354 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PPP1R13BQ96KQ4 1090 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 SPAG5Q96R06 1193 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 P2RY13Q9BPV8 354 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 BPIFA3Q9BQP9 254 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 DDX23Q9BUQ8 820 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 GANQ9H2C0 597 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 C8orf33Q9H7E9 229 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PNPLA8Q9NP80 782 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CYLDQ9NQC7 956 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 ABCC13Q9NSE7 274 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 FAM86C1Q9NVL1 165 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 CLIC5Q9NZA1 410 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 MARCH2Q9P0N8 246 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 NAALADL1Q9UQQ1 740 aa6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 MRPS17Q9Y2R5 130 aaKnown RBP6.04□□□□□ -1.44
HMGB3P24-201ENST00000433260 PRUNE2Q8WUY3 3088 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SYNJ2BP-COX16A0A087WUM0 186 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 GOLGA6L7A0A1B0GV03 622 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 E5RJQ4 531 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms