RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 YY1P25490 414 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 MCM5P33992 734 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 CARSP49589 748 aaKnown RBP5.54□□□□□ -1.52
PTPN4-204ENST00000431283 LINC00205P59089 165 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 FMO1Q01740 532 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 CFHR1Q03591 330 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 FAM102BQ5T8I3 360 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 LVRNQ6Q4G3 990 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 CRELD2Q6UXH1 353 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-204ENST00000431283 ZNF793Q6ZN11 406 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 COLCA1Q6ZS62 124 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 SDR16C5Q8N3Y7 309 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 METTL25Q8N6Q8 603 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 NUAK2Q9H093 628 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 CHST8Q9H2A9 424 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 ZNF580Q9UK33 172 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 ASAP1Q9ULH1 1129 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 MAGI3Q5TCQ9 1506 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-204ENST00000431283 AGPSO00116 658 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 TMEM225BP0DP42 221 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 ATF7P17544 494 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-204ENST00000431283 NTSR1P30989 418 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 JAK3P52333 1124 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 GPC5P78333 572 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 DEUP1Q05D60 604 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 KPNB1Q14974 876 aaKnown RBP5.53□□□□□ -1.52
PTPN4-204ENST00000431283 CLCA4Q14CN2 919 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 POLD3Q15054 466 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-204ENST00000431283 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 KIAA0753Q2KHM9 967 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 KIAA1161Q6NSJ0 714 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 UNC13DQ70J99 1090 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 ZFYVE19Q96K21 471 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 DKK4Q9UBT3 224 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 ZNF212Q9UDV6 495 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 SLC27A6Q9Y2P4 619 aa5.53□□□□□ -1.52
PTPN4-204ENST00000431283 KIAA0556O60303 1618 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 MAP3K4Q9Y6R4 1608 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 HECW2Q9P2P5 1572 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 B4DGG1 531 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 GOLIM4O00461 696 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 CNOT3O75175 753 aaKnown RBP5.52□□□□□ -1.53
PTPN4-204ENST00000431283 BTF3P20290 206 aaKnown RBP5.52□□□□□ -1.53
PTPN4-204ENST00000431283 KCNAB1Q14722 419 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 MIDNQ504T8 468 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 USP49Q70CQ1 688 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 SRGAP1Q7Z6B7 1085 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 UBE2Q1Q7Z7E8 422 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 SKAP1Q86WV1 359 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 ADAMTS15Q8TE58 950 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 APIPQ96GX9 242 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 FAM234AQ9H0X4 552 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 COL20A1Q9P218 1284 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 TCEAL9Q9UHQ7 104 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 HPSEQ9Y251 543 aa5.52□□□□□ -1.53
PTPN4-204ENST00000431283 PPRC1Q5VV67 1664 aaKnown RBP5.52□□□□□ -1.53
PTPN4-204ENST00000431283 ZCCHC11Q5TAX3 1644 aaKnown RBP5.52□□□□□ -1.53
PTPN4-204ENST00000431283 CA12O43570 354 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 SCGB1D2O95969 90 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 S100BP04271 92 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-204ENST00000431283 MYF5P13349 255 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 SRSF1Q07955 248 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPN4-204ENST00000431283 DAB2IPQ5VWQ8 1189 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 FAM177A1Q8N128 213 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-204ENST00000431283 ZNF548Q8NEK5 533 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-204ENST00000431283 ZDHHC12Q96GR4 267 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 MARK4Q96L34 752 aa5.51□□□□□ -1.53
PTPN4-204ENST00000431283 FNDC1Q4ZHG4 1894 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-204ENST00000431283 GOLGA6CA6NDK9 693 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 GOLGA6BA6NDN3 693 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 PLEKHD1A6NEE1 506 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 SYF2O95926 243 aaKnown RBP5.5□□□□□ -1.53
PTPN4-204ENST00000431283 ALPLP05186 524 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 SLC3A2P08195 630 aaKnown RBP5.5□□□□□ -1.53
PTPN4-204ENST00000431283 GOLGA6DP0CG33 693 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 TMIGD3P0DMS9 266 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-204ENST00000431283 IL1R1P14778 569 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 THBS4P35443 961 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 WDR5P61964 334 aaKnown RBP5.5□□□□□ -1.53
PTPN4-204ENST00000431283 FAM193AP78312 1265 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 MTX1Q13505 466 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 MANEAQ5SRI9 462 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 NXNQ6DKJ4 435 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 RNF44Q7L0R7 432 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 FAM156AQ8NDB6 213 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 WASF1Q92558 559 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 PIGKQ92643 395 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 LYZL4Q96KX0 146 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 NLRP4Q96MN2 994 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 SCNM1Q9BWG6 230 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 TBC1D23Q9NUY8 699 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 TMEM45AQ9NWC5 275 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 GOLGA6AQ9NYA3 693 aa5.5□□□□□ -1.53
PTPN4-204ENST00000431283 RGS17Q9UGC6 210 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-204ENST00000431283 HEMK1Q9Y5R4 338 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms