RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 TLR6Q9Y2C9 796 aa18.9■□□□□ 0.62
CDC42EP1-203ENST00000430687 EPN1Q9Y6I3 576 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP1-203ENST00000430687 SPTBN5Q9NRC6 3674 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLC12A8A0AV02 714 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 C2CD4BA6NLJ0 364 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 TRUB2O95900 331 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 F9P00740 461 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 RFC1P35251 1148 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 FLT3P36888 993 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 EIF4EBP2Q13542 120 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 TDGQ13569 410 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 SPA17Q15506 151 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLC25A52Q3SY17 297 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 HTR3DQ70Z44 454 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 PHLDB2Q86SQ0 1253 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 YAF2Q8IY57 180 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 CCDC112Q8NEF3 446 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 RSAD2Q8WXG1 361 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 CTNNBL1Q8WYA6 563 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 PGAP3Q96FM1 320 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 PDLIM2Q96JY6 352 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 LRRC3BQ96PB8 259 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 RPP25Q9BUL9 199 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 TRMT61BQ9BVS5 477 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 THAP2Q9H0W7 228 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 CFAP97Q9P2B7 532 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 TBC1D14Q9P2M4 693 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 LSM7Q9UK45 103 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 ZNF510Q9Y2H8 683 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 SH3BP1Q9Y3L3 701 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 ANAPC1Q9H1A4 1944 aa18.89■□□□□ 0.61
CDC42EP1-203ENST00000430687 SOWAHDA6NJG2 315 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLC9A3R1O14745 358 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 CHADO15335 359 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 STC2O76061 302 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 NDUFA10O95299 355 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 IPO7O95373 1038 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 IGLV3-27P01718 113 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 CYP1A2P05177 515 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 TMEM253P0C7T8 217 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 PDGFRAP16234 1089 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 ABCB4P21439 1286 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 PTPN9P43378 593 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 MTA1Q13330 715 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 MTF1Q14872 753 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 ARHGAP29Q52LW3 1261 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 CC2D1AQ6P1N0 951 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 TAC4Q86UU9 113 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 DNAAF5Q86Y56 855 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 RNF135Q8IUD6 432 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 UNC45BQ8IWX7 931 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 OTUB2Q96DC9 234 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 SORCS3Q9UPU3 1222 aa18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 NUP210Q8TEM1 1887 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP1-203ENST00000430687 TMEM191CA6NGB0 347 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 ZNF263O14978 683 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 IRAK2O43187 625 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 NRDCO43847 1150 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 ENDOD1O94919 500 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 ASGR2P07307 311 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLC2A3P11169 496 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 DESP17661 470 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 GPD1P21695 349 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 SDC4P31431 198 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 HARS2P49590 506 aaKnown RBP18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 ZNF143P52747 638 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 TBX4P57082 545 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 NUGGCQ68CJ6 796 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 TRNP1Q6NT89 227 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 BNIPLQ7Z465 357 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 LRRC8AQ8IWT6 810 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 EMC1Q8N766 993 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 DOCK8Q8NF50 2099 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 FNIP1Q8TF40 1166 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 RXFP2Q8WXD0 754 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 AZIN2Q96A70 460 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLC39A13Q96H72 371 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 MCEEQ96PE7 176 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 UHRF1Q96T88 793 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 FAM204AQ9H8W3 233 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 TRPV5Q9NQA5 729 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.87■□□□□ 0.619e-8■■■■□ 23.8
CDC42EP1-203ENST00000430687 MYO1AQ9UBC5 1043 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 PAXBP1Q9Y5B6 917 aa18.87■□□□□ 0.61
CDC42EP1-203ENST00000430687 M0QYT0 321 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 GREM1O60565 184 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 LATS1O95835 1130 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 MAGEA1P43355 309 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 SULT1E1P49888 294 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 RPL7AP62424 266 aaKnown RBP18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 PDGFRLQ15198 375 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 CCDC14Q49A88 953 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 RAD9BQ6WBX8 426 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 Q6ZNB5 142 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 SND1Q7KZF4 910 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 STRADAQ7RTN6 431 aa18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 ST13P5Q8NFI4 369 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-203ENST00000430687 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms