RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PRKD1Q15139 912 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 CCL14Q16627 93 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 FAM187BQ17R55 369 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 CYP4A22Q5TCH4 519 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ATF7IP2Q5U623 682 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TXNRD3NBQ6F5E7 133 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF276Q8N554 614 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 MCUQ8NE86 351 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SPATA18Q8TC71 538 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TEKT4Q8WW24 435 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TMEM176AQ96HP8 235 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 FAM84AQ96KN4 292 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 NUDCD1Q96RS6 583 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ADPGKQ9BRR6 497 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TRIM6Q9C030 488 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 KLC2Q9H0B6 622 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 EPHX3Q9H6B9 360 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 KIF9Q9HAQ2 790 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 NPHS2Q9NP85 383 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 METTL5Q9NRN9 209 aaKnown RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 PRMT7Q9NVM4 692 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 GRID1Q9ULK0 1009 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TEX264Q9Y6I9 313 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 BRWD1Q9NSI6 2320 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 DMDP11532 3685 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TRIM43BA6NCK2 446 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 A8MUI8 341 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 GOLGA8MH3BSY2 632 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 COPEO14579 308 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 BIRC5O15392 142 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 PRPSAP2O60256 369 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 HBP1O60381 514 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CILPO75339 1184 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 KRT38O76015 456 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 MICAL2O94851 1124 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ERBB2P04626 1255 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 EDN1P05305 212 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ATP6V1C1P21283 382 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 PRKCHP24723 683 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CALRP27797 417 aaKnown RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 TCF7P36402 384 aaPredicted RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CCNFP41002 786 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ELK3P41970 407 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ETV4P43268 484 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 DYNLT1P63172 113 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CTC1Q2NKJ3 1217 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF394Q53GI3 561 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 HP1BP3Q5SSJ5 553 aaPredicted RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 STXBP5Q5T5C0 1151 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ANKRD22Q5VYY1 191 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 LBX2Q6XYB7 198 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CYS1Q717R9 158 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 MTDHQ86UE4 582 aaKnown RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ALYREFQ86V81 257 aaKnown RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 LRRC6Q86X45 466 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ZDHHC17Q8IUH5 632 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 CDKL3Q8IVW4 592 aaPredicted RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 UNC45BQ8IWX7 931 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ARFGAP1Q8N6T3 406 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.02□□□□□ -0.973e-6■■□□□ 12.2
GABPB1-205ENST00000429662 FAM71DQ8N9W8 422 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 RNF149Q8NC42 400 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 TRIM43Q96BQ3 446 aaPredicted RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 FAF2Q96CS3 445 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 PTCD3Q96EY7 689 aaKnown RBP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 C7orf26Q96N11 449 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF570Q96NI8 536 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 RNF157Q96PX1 679 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 DNAI2Q9GZS0 605 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 FAM96AQ9H5X1 160 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 THEGQ9P2T0 379 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 MORF4L1Q9UBU8 362 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
GABPB1-205ENST00000429662 SPTBN4Q9H254 2564 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 ZFHX4Q86UP3 3567 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 PARP14Q460N5 1801 aa9.02□□□□□ -0.97
GABPB1-205ENST00000429662 TCRBV9S1A1TA0A576 114 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 F8W8V4 182 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 H7C0C1 242 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 APOL1O14791 398 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 GYG2O15488 501 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 GSC2O15499 205 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 MAGEC1O60732 1142 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 TMEM63AO94886 807 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SLC25A27O95847 323 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SRGAP2CP0DJJ0 459 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 ESRRAP11474 423 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms