RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 BECN1Q14457 450 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 COL28A1Q2UY09 1125 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 FBXO47Q5MNV8 452 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ARHGEF16Q5VV41 709 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 MBNL2Q5VZF2 373 aaKnown RBP7.04□□□□□ -1.28
PTPRK-211ENST00000429595 TAF2Q6P1X5 1199 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 VRK3Q8IV63 474 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 MDGA1Q8NFP4 955 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 NELL1Q92832 810 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 HAS1Q92839 578 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 LENG9Q96B70 501 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ZNF512Q96ME7 567 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-211ENST00000429595 IWS1Q96ST2 819 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 MEIS3Q99687 375 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ZBTB40Q9NUA8 1239 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ZNF215Q9UL58 517 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-211ENST00000429595 PLXNA4Q9HCM2 1894 aa7.04□□□□□ -1.28
PTPRK-211ENST00000429595 MYO5AQ9Y4I1 1855 aaKnown RBP7.04□□□□□ -1.28
PTPRK-211ENST00000429595 ASH1LQ9NR48 2969 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 SURF6O75683 361 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 GGPS1O95749 300 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 EPCAMP16422 314 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 BMP5P22003 454 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 RDXP35241 583 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 ADRA1BP35368 520 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 DEKP35659 375 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 HSDL1Q3SXM5 330 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 C2orf27AQ580R0 203 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 ZNF276Q8N554 614 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 SSH1Q8WYL5 1049 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 MAP4K1Q92918 833 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 TUBGCP5Q96RT8 1024 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 RMDN3Q96TC7 470 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 C16orf70Q9BSU1 422 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 API5Q9BZZ5 524 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 RANBP17Q9H2T7 1088 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 PCIF1Q9H4Z3 704 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 UPF2Q9HAU5 1272 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 ATP6V0A4Q9HBG4 840 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 DBNLQ9UJU6 430 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 STX8Q9UNK0 236 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 MRPS17Q9Y2R5 130 aaKnown RBP7.03□□□□□ -1.28
PTPRK-211ENST00000429595 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 CDY2AQ9Y6F7 541 aa7.03□□□□□ -1.28
PTPRK-211ENST00000429595 CCDC171Q6TFL3 1326 aa7.02□□□□□ -1.28
PTPRK-211ENST00000429595 NRCAMQ92823 1304 aa7.02□□□□□ -1.28
PTPRK-211ENST00000429595 IGKV6D-41A0A0C4DH26 115 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 DENND3A2RUS2 1198 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 GOLIM4O00461 696 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 PRDM1O75626 825 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 GNAI2P04899 355 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 JUNP05412 331 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SLC3A2P08195 630 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SLC16A2P36021 539 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 ZNF460Q14592 562 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 EPHA7Q15375 998 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SF3A2Q15428 464 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 MLF2Q15773 248 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 CELF3Q5SZQ8 465 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 FAM102BQ5T8I3 360 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SYDE2Q5VT97 1194 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 DAB2IPQ5VWQ8 1189 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 ESRP1Q6NXG1 681 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 DPY19L2P1Q6NXN4 242 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 C15orf39Q6ZRI6 1047 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 TAAR1Q96RJ0 339 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 DNAJC2Q99543 621 aaKnown RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 PITHD1Q9GZP4 211 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-211ENST00000429595 EPS15L1Q9UBC2 864 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 PADI3Q9ULW8 664 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 SQORQ9Y6N5 450 aa7.02□□□□□ -1.29
PTPRK-211ENST00000429595 A0A0A6YYK5 440 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 GOLGA6L6A8MZA4 724 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 PLD2O14939 933 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 DNAJC8O75937 253 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 LGALS2P05162 132 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 TRIM27P14373 513 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 ZFP36P26651 326 aaKnown RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 KLRC2P26717 231 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 HOXC8P31273 242 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 KIR2DL3P43628 341 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 GPC5P78333 572 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 MRPS6P82932 125 aaKnown RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 TFAP4Q01664 338 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 SPIDRQ14159 915 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 SBK1Q52WX2 424 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
PTPRK-211ENST00000429595 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
PTPRK-211ENST00000429595 NAIF1Q69YI7 327 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms