RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ALS2CR12Q96Q35 445 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 UVRAGQ9P2Y5 699 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 AMFRQ9UKV5 643 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 INTUQ9ULD6 942 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 STRIP2Q9ULQ0 834 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 USP18Q9UMW8 372 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 R3HDM2Q9Y2K5 976 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ADH1AP07327 375 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 RARGP13631 454 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 CAPN2P17655 700 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 GABRR2P28476 465 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 MATKP42679 507 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 RPS6KA1Q15418 735 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 TEX35Q5T0J7 233 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 PM20D1Q6GTS8 502 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 MFSD7Q6UXD7 560 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 NPNTQ6UXI9 565 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 CREG2Q8IUH2 290 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 RNF10Q8N5U6 811 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 MYO18AQ92614 2054 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 HES6Q96HZ4 224 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 VCPIP1Q96JH7 1222 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM204AQ9H8W3 233 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 MRPL47Q9HD33 250 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 ETNK2Q9NVF9 386 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 DNMT3BQ9UBC3 853 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 SNX12Q9UMY4 172 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 JRKLQ9Y4A0 524 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 A0A0A6YYK5 440 aaPredicted RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 LRRD1A4D1F6 860 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 CREB3O43889 395 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 TLR5O60602 858 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZMYND10O75800 440 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 SEC31AO94979 1220 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRUB2O95900 331 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 SRGAP2BP0DMP2 458 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 VSTM1Q6UX27 236 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 NOA1Q8NC60 698 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 ITFG1Q8TB96 612 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 STK32AQ8WU08 396 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 SNRNP25Q9BV90 132 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 PARD6BQ9BYG5 372 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 RXFP1Q9HBX9 757 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 CNGB3Q9NQW8 809 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 RASAL2Q9UJF2 1139 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 F5P12259 2224 aa9.92□□□□□ -0.82
HMGCLL1-206ENST00000428842 OBSL1O75147 1896 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 BTNL10A8MVZ5 291 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRIM66O15016 1216 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 COCHO43405 550 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 HSF2BPO75031 334 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SASH3O75995 380 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 FGGP02679 453 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 MYBL1P10243 752 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 RALAP11233 206 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SNX1Q13596 522 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 RFWD3Q6PCD5 774 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 CEP112Q8N8E3 955 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 RNF34Q969K3 372 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 C8orf48Q96LL4 319 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 NPY6RQ99463 290 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 DHX35Q9H5Z1 703 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 WDR6Q9NNW5 1121 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 FBXW11Q9UKB1 542 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SAR1BQ9Y6B6 198 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 MYO10Q9HD67 2058 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ARHGEF37A1IGU5 675 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF840PA6NDX5 716 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 F5H423 210 aaPredicted RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 H3BQ06 376 aaPredicted RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 FSCN2O14926 492 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 MTA2O94776 668 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 KRT1P04264 644 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 GOT1P17174 413 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 KCNJ1P48048 391 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TUBB4BP68371 445 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 DEUP1Q05D60 604 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 HYAL1Q12794 435 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 BRD3Q15059 726 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRADDQ15628 312 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 RARS2Q5T160 578 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SYCP2LQ5T4T6 812 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF662Q6ZS27 426 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 HDAC7Q8WUI4 952 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 C1orf54Q8WWF1 131 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 CNPY3Q9BT09 278 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms