RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 CLEC4EQ9ULY5 219 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 SH3BP5O60239 455 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 NDUFS2O75306 463 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 PFKFB1P16118 471 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 KIF11P52732 1056 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 PLEKHG6Q3KR16 790 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 ZCCHC14Q8WYQ9 949 aaKnown RBP17.41■□□□□ 0.38
VARS-216ENST00000428445 TAF4BQ92750 862 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 ZNF419Q96HQ0 510 aaPredicted RBP17.41■□□□□ 0.38
VARS-216ENST00000428445 NT5C1AQ9BXI3 368 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 RASAL2Q9UJF2 1139 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 FRMD4BQ9Y2L6 1034 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 STON1Q9Y6Q2 735 aa17.41■□□□□ 0.38
VARS-216ENST00000428445 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 IKBKBO14920 756 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 ZBTB24O43167 697 aaPredicted RBP17.4■□□□□ 0.38
VARS-216ENST00000428445 ZNF217O75362 1048 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 GOLGA8FQ08AF8 430 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 GOLGA8DPQ0D2H9 430 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 INCA1Q0VD86 236 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 EFEMP1Q12805 493 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 FUT11Q495W5 492 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 PNPLA1Q8N8W4 532 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 SORCS1Q8WY21 1168 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 NDRG1Q92597 394 aaKnown RBP17.4■□□□□ 0.38
VARS-216ENST00000428445 SEMA4DQ92854 862 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 MKRN2Q9H000 416 aaKnown RBP17.4■□□□□ 0.38
VARS-216ENST00000428445 FBXO10Q9UK96 956 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 NEUROG3Q9Y4Z2 214 aa17.4■□□□□ 0.38
VARS-216ENST00000428445 UPK3BL1B0FP48 263 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 UPK3BL2E5RIL1 263 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 TAF4O00268 1085 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 CALUO43852 315 aaPredicted RBP17.39■□□□□ 0.37
VARS-216ENST00000428445 CILPO75339 1184 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 HOXD12P35452 270 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 DPP6P42658 865 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 IL12RB1P42701 662 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 MFAP3P55082 362 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 FYB2Q5VWT5 728 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 TOE1Q96GM8 510 aaKnown RBP17.39■□□□□ 0.37
VARS-216ENST00000428445 HEXIM2Q96MH2 286 aaKnown RBP17.39■□□□□ 0.37
VARS-216ENST00000428445 GPR174Q9BXC1 333 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 DUSP16Q9BY84 665 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 MSRB2Q9Y3D2 182 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 PCDHA5Q9Y5H7 936 aa17.39■□□□□ 0.37
VARS-216ENST00000428445 FAM208BQ5VWN6 2430 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 MYL1P05976 194 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 NR2F2P24468 414 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 CORO1AP31146 461 aaKnown RBP17.38■□□□□ 0.37
VARS-216ENST00000428445 KLHDC10Q6PID8 442 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 DENND1CQ8IV53 801 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 MIR1-1HGQ9H1L0 117 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 PRDM16Q9HAZ2 1276 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 CYP3A43Q9HB55 503 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 DNAAF2Q9NVR5 837 aaKnown RBP17.38■□□□□ 0.37
VARS-216ENST00000428445 AGO1Q9UL18 857 aaKnown RBP17.38■□□□□ 0.37
VARS-216ENST00000428445 TRAF3IP3Q9Y228 551 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 USP3Q9Y6I4 520 aa17.38■□□□□ 0.37
VARS-216ENST00000428445 GJB3O75712 270 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 PENKP01210 267 aaPredicted RBP17.37■□□□□ 0.37
VARS-216ENST00000428445 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
VARS-216ENST00000428445 SYPP08247 313 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 RALAP11233 206 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 CD6P30203 668 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 NUMA1Q14980 2115 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 TMEM215Q68D42 235 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 FAM186BQ8IYM0 893 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 TATDN2Q93075 761 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 ARID3AQ99856 593 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 NIF3L1Q9GZT8 377 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 WSB2Q9NYS7 404 aaPredicted RBP17.37■□□□□ 0.37
VARS-216ENST00000428445 THAP10Q9P2Z0 257 aaPredicted RBP17.37■□□□□ 0.37
VARS-216ENST00000428445 USP25Q9UHP3 1055 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 PLXNB3Q9ULL4 1909 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 ZFYVE26Q68DK2 2539 aa17.37■□□□□ 0.37
VARS-216ENST00000428445 SLC12A8A0AV02 714 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 TULP2O00295 520 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 GFRA2O00451 464 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 NCAM1P13591 858 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 CMA1P23946 247 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 PRKCHP24723 683 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 NDUFA8P51970 172 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 RING1Q06587 406 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 GRIK2Q13002 908 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 COL9A2Q14055 689 aaPredicted RBP17.36■□□□□ 0.37
VARS-216ENST00000428445 TRIP6Q15654 476 aaKnown RBP17.36■□□□□ 0.37
VARS-216ENST00000428445 SYCP2LQ5T4T6 812 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 TMPRSS6Q8IU80 811 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 ZCCHC9Q8N567 271 aaKnown RBP17.36■□□□□ 0.37
VARS-216ENST00000428445 SLC4A11Q8NBS3 891 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 PIWIL1Q96J94 861 aaKnown RBP17.36■□□□□ 0.37
VARS-216ENST00000428445 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 PNPLA8Q9NP80 782 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 ITM2CQ9NQX7 267 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms