RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SYN2Q92777 582 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 MIEF1Q9NQG6 463 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 DDX4Q9NQI0 724 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 B2RBV5 119 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 E9PBE3 544 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 DYRK3O43781 588 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 KLHL41O60662 606 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 AMPD1P23109 780 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 SEC13P55735 322 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 RPL10AP62906 217 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 SLC29A2Q14542 456 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 ITIH5Q86UX2 942 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 SLC2A14Q8TDB8 520 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 SLC2A4P14672 509 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 CCNG1P51959 295 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 FAM83EQ2M2I3 478 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 AP5B1Q2VPB7 878 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 DENND1CQ8IV53 801 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 PPIL6Q8IXY8 311 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 CIDEBQ9UHD4 219 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 TLL1O43897 1013 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 ANXA9O76027 345 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 UMPSP11172 480 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 LRIG3Q6UXM1 1119 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 A0A087X0T9 212 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 IQCMA0A1B0GVH7 501 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 ZNF189O75820 626 aaPredicted RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 ATP6V1B1P15313 513 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 ATP6V1B2P21281 511 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 GRK2P25098 689 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 PRKAG1P54619 331 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 KHDRBS2Q5VWX1 349 aaKnown RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 MMGT1Q8N4V1 131 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 WDR27A2RRH5 827 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 SNRPAP09012 282 aaKnown RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 GIT2Q14161 759 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 TRIP4Q15650 581 aaPredicted RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 CEP68Q76N32 757 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 TM6SF2Q9BZW4 377 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 GLP2RO95838 553 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 CYP11B1P15538 503 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 XRCC4Q13426 336 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
SPG11-202ENST00000427534 GLT6D1Q7Z4J2 308 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 E2F7Q96AV8 911 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 AXIN1O15169 862 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 RGS5O15539 181 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 IKBKEQ14164 716 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 UGP2Q16851 508 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 TTLL9Q3SXZ7 439 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
SPG11-202ENST00000427534 MEI4A8MW99 385 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.24
SPG11-202ENST00000427534 RRM1P23921 792 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 BCAT1P54687 386 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 PRKAA1Q13131 559 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 MTFR1Q15390 333 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 NFIL3Q16649 462 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.24
SPG11-202ENST00000427534 C7orf61Q8IZ16 206 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 AGLP35573 1532 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.24
SPG11-202ENST00000427534 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 SPATA20Q8TB22 786 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 GRAMD1AQ96CP6 724 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 EXOC2Q96KP1 924 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 CATSPER2Q96P56 530 aa13.52□□□□□ -0.24
SPG11-202ENST00000427534 KDM1AO60341 852 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 AKR1A1P14550 325 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 AMD1P17707 334 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
SPG11-202ENST00000427534 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 PCNX4Q63HM2 1172 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 BTBD9Q96Q07 612 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 NBNO60934 754 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 MRNIPQ6NTE8 343 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.25
SPG11-202ENST00000427534 GPAMQ9HCL2 828 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms