RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CENPIQ92674 756 aaPredicted RBP16.08■□□□□ 0.16
COL11A1-204ENST00000427239 SLC22A12Q96S37 553 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 USTQ9Y2C2 406 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 M0QYT0 321 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 RNF8O76064 485 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 IGLV3-25P01717 112 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 MBL2P11226 248 aaPredicted RBP16.07■□□□□ 0.16
COL11A1-204ENST00000427239 NAP1L1P55209 391 aaKnown RBP16.07■□□□□ 0.16
COL11A1-204ENST00000427239 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 OTOP3Q7RTS5 596 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 ZSWIM3Q96MP5 696 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 TDP1Q9NUW8 608 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 TLR6Q9Y2C9 796 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 HBS1LQ9Y450 684 aaKnown RBP16.07■□□□□ 0.16
COL11A1-204ENST00000427239 PAXBP1Q9Y5B6 917 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
COL11A1-204ENST00000427239 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 PSMA2P25787 234 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 SULT1E1P49888 294 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 ATP11AP98196 1134 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 EIF4EBP2Q13542 120 aaPredicted RBP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 SMAD2Q15796 467 aaKnown RBP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 AAK1Q2M2I8 961 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 BNIPLQ7Z465 357 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 ACSF2Q96CM8 615 aaPredicted RBP16.06■□□□□ 0.16
COL11A1-204ENST00000427239 TBCBQ99426 244 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 FAM204AQ9H8W3 233 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 DDIT4Q9NX09 232 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 PYCARDQ9ULZ3 195 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 ARHGAP26Q9UNA1 814 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 DOCK6Q96HP0 2047 aa16.06■□□□□ 0.16
COL11A1-204ENST00000427239 GOLGA6L9A6NEM1 432 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 SLC2A3P11169 496 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 OGDHQ02218 1023 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 RING1Q06587 406 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 PTCRAQ6ISU1 281 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 TAC4Q86UU9 113 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 DDX42Q86XP3 938 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 ZSCAN18Q8TBC5 510 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 FAM172AQ8WUF8 416 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 SMARCD2Q92925 531 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 KLF16Q9BXK1 252 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 TRPV4Q9HBA0 871 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 SALL4Q9UJQ4 1053 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 C2orf16Q68DN1 1984 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 MYO16Q9Y6X6 1858 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 MDM4O15151 490 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 IRAK2O43187 625 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 PROSCO94903 275 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 LAMP2P13473 410 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 CCR1P32246 355 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 RDXP35241 583 aaKnown RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 NME3Q13232 169 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 MTA1Q13330 715 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 C15orf59Q2T9L4 293 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 UNC45BQ8IWX7 931 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 ADAM32Q8TC27 787 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 E2F7Q96AV8 911 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 ASB16Q96NS5 453 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 PHF7Q9BWX1 381 aaPredicted RBP16.05■□□□□ 0.16
COL11A1-204ENST00000427239 KIF9Q9HAQ2 790 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 KCND1Q9NSA2 647 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 CPQQ9Y646 472 aa16.05■□□□□ 0.16
COL11A1-204ENST00000427239 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 BUB1O43683 1085 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 TCF3P15923 654 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 TFE3P19532 575 aaPredicted RBP16.04■□□□□ 0.16
COL11A1-204ENST00000427239 MAN1A1P33908 653 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 PCK1P35558 622 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 SLC1A1P43005 524 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 CXCR3P49682 368 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 TBX4P57082 545 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 ZNF252P-AS1Q0IIN9 211 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 MESDQ14696 234 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 PPP2R5DQ14738 602 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 CDO1Q16878 200 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 FAM78AQ5JUQ0 283 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 NUGGCQ68CJ6 796 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 POTEHQ6S545 545 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 CELF5Q8N6W0 485 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms