RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 AKR1B1P15121 316 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 SLC34A1Q06495 639 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 SPIRE1Q08AE8 756 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 FUT11Q495W5 492 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PRR5LQ6MZQ0 368 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 DHFR2Q86XF0 187 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CAMK1DQ8IU85 385 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 NARFQ9UHQ1 456 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 MROH7Q68CQ1 1323 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TRIM43BA6NCK2 446 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 AREL1O15033 823 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 GYS1P13807 737 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 AQP5P55064 265 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 NAGPAQ9UK23 515 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CCT3P49368 545 aaKnown RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 KLHDC7AQ5VTJ3 777 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TMBIM4Q9HC24 238 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PCDHB7Q9Y5E2 793 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC162PA2VCL2 907 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PLA2G6O60733 806 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PLD1Q13393 1074 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PWP1Q13610 501 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 MFSD4BQ5TF39 518 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 IZUMO1Q8IYV9 350 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF512BQ96KM6 892 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TMEM216Q9P0N5 145 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TRPC4APQ8TEL6 797 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CHP1Q99653 195 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TMEM260Q9NX78 707 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 RECQL5O94762 991 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CYP2C9P11712 490 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 GRIK3Q13003 919 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 FAM220AQ7Z4H9 259 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 ZDHHC13Q8IUH4 622 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 AMER2Q8N7J2 671 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 METTL5Q9NRN9 209 aaKnown RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 HAO1Q9UJM8 370 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC182A6NF36 153 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 LRG1P02750 347 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 SLFN11Q7Z7L1 901 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 C11orf96Q7Z7L8 435 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 ZDHHC17Q8IUH5 632 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 PROX1Q92786 737 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 TMEM120AQ9BXJ8 343 aa14.82□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF624Q9P2J8 865 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-203ENST00000427191 RAD51BO15315 384 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RASA1P20936 1047 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 YY1P25490 414 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CASP1P29466 404 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ACLYP53396 1101 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MSLNQ13421 630 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MIER2Q8N344 545 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 LRRC71Q8N4P6 559 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MAGEC3Q8TD91 643 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RIBC2Q9H4K1 309 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 FKBP14Q9NWM8 211 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 STOML2Q9UJZ1 356 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ING4Q9UNL4 249 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 EPHB2P29323 1055 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 PTGES3Q15185 160 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RGS21Q2M5E4 152 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ZBTB10Q96DT7 871 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 QRFPRQ96P65 431 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 VAV1P15498 845 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 PTPN3P26045 913 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RPA1P27694 616 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 NMT1P30419 496 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RPL3P39023 403 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 FRG1Q14331 258 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 UBP1Q9NZI7 540 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 UBQLN1Q9UMX0 589 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC154A6NI56 674 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 TRIM66O15016 1216 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 STAG3L1P0CL83 205 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 POU1F1P28069 291 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 GMFBP60983 142 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 INTS11Q5TA45 600 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC185Q8N715 623 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 IRGMA1A4Y4 181 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 SERPINE1P05121 402 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RGS7P49802 495 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CYP24A1Q07973 514 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ITGADQ13349 1161 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 STRA8Q7Z7C7 330 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ARHGEF19Q8IW93 802 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF557Q8N988 423 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 BLOC1S5Q8TDH9 187 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 USP42Q9H9J4 1324 aaKnown RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 NMRAL1Q9HBL8 299 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 FBXO28Q9NVF7 368 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RNF181Q9P0P0 153 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MED14O60244 1454 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms