RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 E5RJQ4 531 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 ATG13O75143 517 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 FYNP06241 537 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 CORO1AP31146 461 aaKnown RBP18■□□□□ 0.47
LMCD1-204ENST00000426878 CDH5P33151 784 aaPredicted RBP18■□□□□ 0.47
LMCD1-204ENST00000426878 CHKAP35790 457 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 KLK7P49862 253 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 JAM2P57087 298 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 UBXN1Q04323 297 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 IQCB1Q15051 598 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 PREPLQ4J6C6 727 aaPredicted RBP18■□□□□ 0.47
LMCD1-204ENST00000426878 DDX1Q92499 740 aaKnown RBP18■□□□□ 0.47
LMCD1-204ENST00000426878 NOX5Q96PH1 765 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 PNKPQ96T60 521 aa18■□□□□ 0.47
LMCD1-204ENST00000426878 AGO1Q9UL18 857 aaKnown RBP18■□□□□ 0.47
LMCD1-204ENST00000426878 K7EQS6 105 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 RNF40O75150 1001 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 CAVIN2O95810 425 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 HOXA6P31267 233 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 SLC6A11P48066 632 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 HARS2P49590 506 aaKnown RBP17.99■□□□□ 0.47
LMCD1-204ENST00000426878 NRLP54845 237 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 SNX16P57768 344 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 POLR2FP61218 127 aaKnown RBP17.99■□□□□ 0.47
LMCD1-204ENST00000426878 C12orf40Q86WS4 652 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 FAM217AQ8IXS0 508 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 PHTF2Q8N3S3 785 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 CPXM2Q8N436 756 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 ZBTB44Q8NCP5 570 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 PPP1R13BQ96KQ4 1090 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 CPXM1Q96SM3 734 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 SEMA4AQ9H3S1 761 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 SFMBT1Q9UHJ3 866 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 STOML2Q9UJZ1 356 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 CEP83Q9Y592 693 aa17.99■□□□□ 0.47
LMCD1-204ENST00000426878 EPHB6O15197 1021 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 CACNG3O60359 315 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 TULP3O75386 442 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 LATS1O95835 1130 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 IGLV3-27P01718 113 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 GLI1P08151 1106 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 HMBSP08397 361 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 NCAM1P13591 858 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 GRIA2P42262 883 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 YWHAZP63104 245 aaKnown RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 SATB1Q01826 763 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 RING1Q06587 406 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 NNTQ13423 1086 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ANO4Q32M45 955 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ZC3H14Q6PJT7 736 aaKnown RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ZNF677Q86XU0 584 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 DENND1CQ8IV53 801 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 PASD1Q8IV76 773 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 NEK11Q8NG66 645 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 BBS2Q9BXC9 721 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 RTN4Q9NQC3 1192 aaKnown RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ASNSD1Q9NWL6 643 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ZSCAN32Q9NX65 697 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 DEC1Q9P2X7 70 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 PCDHGA2Q9Y5H1 932 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ATG2BQ96BY7 2078 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 KIAA1549LQ6ZVL6 1849 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 KAT7O95251 611 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 APODP05090 189 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 TYRP14679 529 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 SOX5P35711 763 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 TNFRSF4P43489 277 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 PKN3Q6P5Z2 889 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 TMEM35BQ8NCS4 154 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 C1orf131Q8NDD1 294 aaKnown RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 EPS8L1Q8TE68 723 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 FAM149B1Q96BN6 582 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 XPO6Q96QU8 1125 aaKnown RBP17.98■□□□□ 0.47
LMCD1-204ENST00000426878 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ARHGEF4Q9NR80 690 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 FBXO10Q9UK96 956 aa17.98■□□□□ 0.47
LMCD1-204ENST00000426878 ZFHX2Q9C0A1 2572 aaPredicted RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 NEDD8-MDP1E9PL57 170 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 K7ESF4 209 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 LSM8O95777 96 aaKnown RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 STAT1P42224 750 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 ZNF445P59923 1031 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 MESP2Q0VG99 397 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 PTPN20Q4JDL3 420 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 EFHC1Q5JVL4 640 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 TPGS1Q6ZTW0 290 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 NOP9Q86U38 636 aaKnown RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 ZDHHC17Q8IUH5 632 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 NAT16Q8N8M0 369 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 DQX1Q8TE96 717 aaKnown RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 AZIN2Q96A70 460 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 PCMTD1Q96MG8 357 aaPredicted RBP17.97■□□□□ 0.47
LMCD1-204ENST00000426878 SERPINB11Q96P15 392 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
LMCD1-204ENST00000426878 NLRC4Q9NPP4 1024 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms