RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ZNF677Q86XU0 584 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 DENND1CQ8IV53 801 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 SLC20A1Q8WUM9 679 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 PIWIL1Q96J94 861 aaKnown RBP18.83■□□□□ 0.6
HERC3-205ENST00000426683 IER2Q9BTL4 223 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 SYNCQ9H7C4 482 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 NOCTQ9UK39 431 aaKnown RBP18.83■□□□□ 0.6
HERC3-205ENST00000426683 AGO1Q9UL18 857 aaKnown RBP18.83■□□□□ 0.6
HERC3-205ENST00000426683 NAALADL1Q9UQQ1 740 aa18.83■□□□□ 0.6
HERC3-205ENST00000426683 HBS1LQ9Y450 684 aaKnown RBP18.83■□□□□ 0.6
HERC3-205ENST00000426683 F5P12259 2224 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 MIA3Q5JRA6 1907 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 CAPN9O14815 690 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 HOXC11O43248 304 aaPredicted RBP18.82■□□□□ 0.6
HERC3-205ENST00000426683 LAMTOR5O43504 91 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 SLC6A11P48066 632 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 SNX16P57768 344 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 FANCCQ00597 558 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 GAS6Q14393 721 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 OR6B2Q6IFH4 312 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 TPGS1Q6ZTW0 290 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 FAM183BPQ6ZVS7 135 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 C12orf40Q86WS4 652 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 SYNPOQ8N3V7 929 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 TRIM62Q9BVG3 475 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 IRF2BPLQ9H1B7 796 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 POPDC2Q9HBU9 364 aa18.82■□□□□ 0.6
HERC3-205ENST00000426683 A0A1W2PQC6 194 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 FAM170AA1A519 330 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 LSM8O95777 96 aaKnown RBP18.81■□□□□ 0.6
HERC3-205ENST00000426683 HARS2P49590 506 aaKnown RBP18.81■□□□□ 0.6
HERC3-205ENST00000426683 YWHAZP63104 245 aaKnown RBP18.81■□□□□ 0.6
HERC3-205ENST00000426683 CDR2Q01850 454 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 ARID5AQ03989 594 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 NR1I3Q14994 352 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 TAF5Q15542 800 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 SYPL2Q5VXT5 272 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 NAT16Q8N8M0 369 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 DQX1Q8TE96 717 aaKnown RBP18.81■□□□□ 0.6
HERC3-205ENST00000426683 EZH1Q92800 747 aaPredicted RBP18.81■□□□□ 0.6
HERC3-205ENST00000426683 TSPY26PQ9H489 355 aa18.81■□□□□ 0.6
HERC3-205ENST00000426683 NEDD8-MDP1E9PL57 170 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 GLI1P08151 1106 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 CHRNB2P17787 502 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 EIF2DP41214 584 aaKnown RBP18.8■□□□□ 0.6
HERC3-205ENST00000426683 TBX4P57082 545 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 NHLH1Q02575 133 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 FBXO43Q4G163 708 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 EFHC1Q5JVL4 640 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 OLFML1Q6UWY5 402 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 MAML2Q8IZL2 1156 aaPredicted RBP18.8■□□□□ 0.6
HERC3-205ENST00000426683 ATOH1Q92858 354 aaPredicted RBP18.8■□□□□ 0.6
HERC3-205ENST00000426683 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 PNKPQ96T60 521 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 BBS2Q9BXC9 721 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 ASNSD1Q9NWL6 643 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 MARK1Q9P0L2 795 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 WDR35Q9P2L0 1181 aa18.8■□□□□ 0.6
HERC3-205ENST00000426683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.79■□□□□ 0.6
HERC3-205ENST00000426683 HSF2BPO75031 334 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 RNF40O75150 1001 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 GRAP2O75791 330 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 TYRP14679 529 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 CHKAP35790 457 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 CCR3P51677 355 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 UBASH3AP57075 661 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 NOMO3P69849 1222 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 FMO1Q01740 532 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 SLC6A3Q01959 620 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 KDSRQ06136 332 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 TOGARAM2Q6ZUX3 1019 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 TAC4Q86UU9 113 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 ERICH1Q86X53 443 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 ZDHHC17Q8IUH5 632 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 ETFBKMTQ8IXQ9 262 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 DEFB106AQ8N104 65 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 SPEM1Q8N4L4 309 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 MSANTD4Q8NCY6 345 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 ADAM32Q8TC27 787 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 CPA5Q8WXQ8 436 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 BHMTQ93088 406 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 C18orf8Q96DM3 657 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 XPO6Q96QU8 1125 aaKnown RBP18.79■□□□□ 0.6
HERC3-205ENST00000426683 ARHGEF4Q9NR80 690 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
HERC3-205ENST00000426683 TULP3O75386 442 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 IGLV3-27P01718 113 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 CYP1A1P04798 512 aaPredicted RBP18.78■□□□□ 0.6
HERC3-205ENST00000426683 APODP05090 189 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 SP9P0CG40 484 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 FERP16591 822 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 GABRB2P47870 512 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 SATB1Q01826 763 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 CSTF1Q05048 431 aaKnown RBP18.78■□□□□ 0.6
HERC3-205ENST00000426683 RING1Q06587 406 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 MESP2Q0VG99 397 aa18.78■□□□□ 0.6
HERC3-205ENST00000426683 DCAF6Q58WW2 860 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms