RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 PPP3CCP48454 512 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 DMTNQ08495 405 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 TOP6BLQ8N6T0 577 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 CAMKK2Q96RR4 588 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SOX13Q9UN79 622 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 PJA2O43164 708 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 ALOX15P16050 662 aaPredicted RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 CRABP2P29373 138 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 PGM1P36871 562 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 POU5F1Q01860 360 aaKnown RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 NFIL3Q16649 462 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SLC45A1Q9Y2W3 748 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 PLIN4Q96Q06 1357 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 ZNF185O15231 689 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 MEFVO15553 781 aaPredicted RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 POMCP01189 267 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 TPBGLP0DKB5 382 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 ADIGQ0VDE8 80 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SGCGQ13326 291 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 BBS7Q8IWZ6 715 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 BLOC1S4Q9NUP1 217 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 CYP2A7P20853 494 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 PSMC6P62333 389 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 KYNUQ16719 465 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 CCDC60Q8IWA6 550 aaPredicted RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 TMA16Q96EY4 203 aaKnown RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 INPP4AQ96PE3 977 aaPredicted RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 ACOT9Q9Y305 439 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 LRRC10BA6NIK2 292 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 SERPIND1P05546 499 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 CHN1P15882 459 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 TSHRP16473 764 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 KLK7P49862 253 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 NOL9Q5SY16 702 aaKnown RBP10.47□□□□□ -0.73
SP1-202ENST00000426431 SLC47A2Q86VL8 602 aa10.47□□□□□ -0.73
SP1-202ENST00000426431 TRIM49D1C9J1S8 452 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 KPNA5O15131 536 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 MRPS25P82663 173 aaKnown RBP10.46□□□□□ -0.73
SP1-202ENST00000426431 E2F4Q16254 413 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 EPC2Q52LR7 807 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 ZNF571Q7Z3V5 609 aaPredicted RBP10.46□□□□□ -0.73
SP1-202ENST00000426431 FAM131BQ86XD5 332 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 ZNF333Q96JL9 665 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.73
SP1-202ENST00000426431 NCKIPSDQ9NZQ3 722 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 CCDC78A2IDD5 438 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 KCNA4P22459 653 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 HTR7P34969 479 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 ATXN3LQ9H3M9 355 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 DNMT3LQ9UJW3 386 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 VANGL2Q9ULK5 521 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 PCDHA3Q9Y5H8 950 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
SP1-202ENST00000426431 MAP3K13O43283 966 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 SNHG28P0DPA3 235 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 PTPN1P18031 435 aaKnown RBP10.46□□□□□ -0.73
SP1-202ENST00000426431 LAG3P18627 525 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 SEZ6Q53EL9 994 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 HECTD3Q5T447 861 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 GRTP1Q5TC63 336 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 PDPK2PQ6A1A2 396 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 KATNAL2Q8IYT4 538 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 DTX3LQ8TDB6 740 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 WNT8BQ93098 351 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 HES6Q96HZ4 224 aa10.46□□□□□ -0.73
SP1-202ENST00000426431 ZNF862O60290 1169 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 NPR3P17342 541 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 OR1E1P30953 314 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 ICAM3P32942 547 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 ZNF280AP59817 542 aaPredicted RBP10.46□□□□□ -0.74
SP1-202ENST00000426431 NCALDP61601 193 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 MPP3Q13368 585 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 GRM3Q14832 879 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 LONRF1Q17RB8 773 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 DENND5BQ6ZUT9 1274 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 CIPCQ9C0C6 399 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 ATP13A1Q9HD20 1204 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 TMEM120BA0PK00 339 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 VPS4BO75351 444 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 GLRA2P23416 452 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 SERPINA4P29622 427 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.74
SP1-202ENST00000426431 CCDC153Q494R4 210 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 APOL5Q9BWW9 433 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 AKAP7Q9P0M2 348 aaPredicted RBP10.46□□□□□ -0.74
SP1-202ENST00000426431 SNTNA6NMZ2 147 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 APOC4-APOC2K7ER74 178 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 TRDMT1O14717 391 aaKnown RBP10.46□□□□□ -0.74
SP1-202ENST00000426431 JCHAINP01591 159 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 APOC2P02655 101 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 HSPA13P48723 471 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 LYPLAL1Q5VWZ2 237 aa10.46□□□□□ -0.74
SP1-202ENST00000426431 LVRNQ6Q4G3 990 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms