RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CACNA2D2Q9NY47 1150 aa15.78■□□□□ 0.12
ATG4B-209ENST00000425239 PLK2Q9NYY3 685 aa15.78■□□□□ 0.12
ATG4B-209ENST00000425239 HPSEQ9Y251 543 aa15.78■□□□□ 0.12
ATG4B-209ENST00000425239 PCDHA5Q9Y5H7 936 aa15.78■□□□□ 0.12
ATG4B-209ENST00000425239 TAF4O00268 1085 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 PDIA4P13667 645 aaKnown RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 DGKGP49619 791 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 SIM1P81133 766 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 DNM1Q05193 864 aaKnown RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 PPP1R26Q5T8A7 1209 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 DNASE2BQ8WZ79 361 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 PIWIL1Q96J94 861 aaKnown RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 HSPA12BQ96MM6 686 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 NT5C1AQ9BXI3 368 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 DUSP16Q9BY84 665 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 MKRN2Q9H000 416 aaKnown RBP15.77■□□□□ 0.12
ATG4B-209ENST00000425239 CYP3A43Q9HB55 503 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■■■■ 96.1
ATG4B-209ENST00000425239 CLIC5Q9NZA1 410 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 DNMT3LQ9UJW3 386 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 CLEC4EQ9ULY5 219 aa15.77■□□□□ 0.12
ATG4B-209ENST00000425239 CACNA1GO43497 2377 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 C7P10643 843 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 HOXB3P14651 431 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 GCLMP48507 274 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 VAMP7P51809 220 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 MFAP3P55082 362 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 GEN1Q17RS7 908 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 FUT11Q495W5 492 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 SDE2Q6IQ49 451 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 RAB44Q7Z6P3 723 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 CEP57L1Q8IYX8 460 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 CAMK1GQ96NX5 476 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 GTPBP2Q9BX10 602 aaKnown RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 ITM2CQ9NQX7 267 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 USP36Q9P275 1121 aaKnown RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 THAP10Q9P2Z0 257 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-209ENST00000425239 STON1Q9Y6Q2 735 aa15.76■□□□□ 0.11
ATG4B-209ENST00000425239 PLXNB3Q9ULL4 1909 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 FAM237AA0A1B0GTK4 181 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 A0A1B0GVL5 298 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 OPHN1O60890 802 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 CMA1P23946 247 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 MAOBP27338 520 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 IL12RB1P42701 662 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 PSEN1P49768 467 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 ENPEPQ07075 957 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 SLC14A1Q13336 389 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 RAB41Q5JT25 222 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 C10orf120Q5SQS8 335 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 CEP135Q66GS9 1140 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 TMEM215Q68D42 235 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 RABEPKQ7Z6M1 372 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 CHCHD4Q8N4Q1 142 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 C1orf216Q8TAB5 229 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 BHMTQ93088 406 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 JAKMIP2Q96AA8 810 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 UBXN6Q9BZV1 441 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
ATG4B-209ENST00000425239 LSM7Q9UK45 103 aaKnown RBP15.75■□□□□ 0.11
ATG4B-209ENST00000425239 CKAP5Q14008 2032 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 SH3BP5O60239 455 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 CBFA2T3O75081 653 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 RHOBTB3O94955 611 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 IGLV3-19P01714 112 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 MYL1P05976 194 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 PFKFB1P16118 471 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 PIK3CAP42336 1068 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 COPAP53621 1224 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 BHLHA9Q7RTU4 235 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 FAM217AQ8IXS0 508 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 HDDC3Q8N4P3 179 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 SLC4A11Q8NBS3 891 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 SEMA4DQ92854 862 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 NAGPAQ9UK23 515 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 CFAP45Q9UL16 551 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 AGO1Q9UL18 857 aaKnown RBP15.74■□□□□ 0.11
ATG4B-209ENST00000425239 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 NFE2L3Q9Y4A8 694 aa15.74■□□□□ 0.11
ATG4B-209ENST00000425239 ANKRD11Q6UB99 2663 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-209ENST00000425239 ATRXP46100 2492 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 H0Y626 953 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 TRIM16O95361 564 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 SYPP08247 313 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 CD58P19256 250 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 NR2F2P24468 414 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 CD6P30203 668 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 ZNF132P52740 706 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 ATXN3P54252 364 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-209ENST00000425239 COG7P83436 770 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 BNC1Q01954 994 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 GOLGA8FQ08AF8 430 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 GOLGA8DPQ0D2H9 430 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms