RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CCDC50Q8IVM0 306 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 AUTS2Q8WXX7 1259 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 CLP1Q92989 425 aaKnown RBP15.62■□□□□ 0.09
CALD1-206ENST00000424922 C8orf48Q96LL4 319 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 SEPT5Q99719 369 aaPredicted RBP15.62■□□□□ 0.09
CALD1-206ENST00000424922 CLSTN3Q9BQT9 956 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
CALD1-206ENST00000424922 PABPC3Q9H361 631 aaKnown RBP15.62■□□□□ 0.09
CALD1-206ENST00000424922 POPDC2Q9HBU9 364 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 USP18Q9UMW8 372 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 USP3Q9Y6I4 520 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 URODP06132 367 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 PCK1P35558 622 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 PMS2P54278 862 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 PLTPP55058 493 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 KRT17Q04695 432 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 DUSP4Q13115 394 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 MGAT5BQ3V5L5 792 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 SYPL2Q5VXT5 272 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 BHLHA9Q7RTU4 235 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 CCDC105Q8IYK2 499 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 GPR152Q8TDT2 470 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 HOMER3Q9NSC5 361 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 NAALADL1Q9UQQ1 740 aa15.62■□□□□ 0.09
CALD1-206ENST00000424922 PI4K2BG5E9Z4 385 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 CAPN9O14815 690 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 ECEL1O95672 775 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 TRUB2O95900 331 aaKnown RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 LTFP02788 710 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 KRT1P04264 644 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 FYNP06241 537 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 KRT7P08729 469 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 MDH1P40925 334 aaKnown RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 SATB1Q01826 763 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SLMAPQ14BN4 828 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SCYL2Q6P3W7 929 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 FOXR1Q6PIV2 292 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 POLNQ7Z5Q5 900 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 KLHL23Q8NBE8 558 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 OR2W6PQ8NHA6 318 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 EXD1Q8NHP7 514 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 FBXO25Q8TCJ0 367 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SP7Q8TDD2 431 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 C2orf15Q8WU43 125 aaKnown RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 ART4Q93070 314 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 SLC2A13Q96QE2 648 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 PEBP4Q96S96 227 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 TBCBQ99426 244 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 C11orf84Q9BUA3 381 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 ATP8A1Q9Y2Q0 1164 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 NOS2P35228 1153 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SULT1E1P49888 294 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 HDAC4P56524 1084 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 MYO7AQ13402 2215 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SLC25A52Q3SY17 297 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 ODF2Q5BJF6 829 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 DNAJC21Q5F1R6 531 aaKnown RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 HOOK3Q86VS8 718 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 NUP93Q8N1F7 819 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 SCML4Q8N228 414 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 IRGQQ8WZA9 623 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 EDEM1Q92611 657 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 CENPIQ92674 756 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 TMEM109Q9BVC6 243 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 EPB41L4BQ9H329 900 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 DDX56Q9NY93 547 aaKnown RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 WHRNQ9P202 907 aa15.61■□□□□ 0.09
CALD1-206ENST00000424922 FEZ2Q9UHY8 353 aaPredicted RBP15.61■□□□□ 0.09
CALD1-206ENST00000424922 PRPSAP2O60256 369 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 NCAM1P13591 858 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 ATP1A2P50993 1020 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 ATXN1P54253 815 aaKnown RBP15.6■□□□□ 0.09
CALD1-206ENST00000424922 PITX1P78337 314 aaPredicted RBP15.6■□□□□ 0.09
CALD1-206ENST00000424922 C9orf50Q5SZB4 431 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 SRLQ86TD4 932 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 RCOR2Q8IZ40 523 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 BCAS4Q8TDM0 211 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 GRK7Q8WTQ7 553 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 RAPGEF5Q92565 580 aa15.6■□□□□ 0.09
CALD1-206ENST00000424922 MRPL17Q9NRX2 175 aaKnown RBP15.6■□□□□ 0.09
CALD1-206ENST00000424922 RANBP2P49792 3224 aaKnown RBP15.6■□□□□ 0.09
CALD1-206ENST00000424922 LRRD1A4D1F6 860 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 LSP1P33241 339 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 RASIP1Q5U651 963 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 BSPRYQ5W0U4 402 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 CYP4V2Q6ZWL3 525 aaPredicted RBP15.59■□□□□ 0.09
CALD1-206ENST00000424922 ANKS1BQ7Z6G8 1248 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 HSPH1Q92598 858 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 NT5C3BQ969T7 300 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 TLCD1Q96CP7 247 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 RBM41Q96IZ5 413 aaKnown RBP15.59■□□□□ 0.09
CALD1-206ENST00000424922 SLITRK1Q96PX8 696 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 HEMGNQ9BXL5 484 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 STAP1Q9ULZ2 295 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 SYNJ2BP-COX16A0A087WUM0 186 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 RALAP11233 206 aa15.59■□□□□ 0.09
CALD1-206ENST00000424922 RARGP13631 454 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms