RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GABPB2Q8TAK5 448 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 DHRS1Q96LJ7 313 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CDRT15Q96T59 188 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SNHG28P0DPA3 235 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 PFKPQ01813 784 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 TEX44Q53QW1 395 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 KRT39Q6A163 491 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 PPIL6Q8IXY8 311 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 KATNAL2Q8IYT4 538 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 NAT8LQ8N9F0 302 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 DHRS4Q9BTZ2 278 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 SLC38A7Q9NVC3 462 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNF358Q9NW07 568 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 TMA7Q9Y2S6 64 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 A0A0B4J269 797 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 A6NL46 340 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZBTB14O43829 449 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZBTB11O95625 1053 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 LDHAP00338 332 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 THOP1P52888 689 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 NR1H2P55055 460 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNF252P-AS1Q0IIN9 211 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 FLOT2Q14254 428 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 CYP2A13Q16696 494 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 FASTKD1Q53R41 847 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 LDLRAP1Q5SW96 308 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 PDPK2PQ6A1A2 396 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 DCUN1D2Q6PH85 259 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 FBXL13Q8NEE6 735 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 BHLHE22Q8NFJ8 381 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ALKBH8Q96BT7 664 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNRF3Q9ULT6 936 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 SHOC2Q9UQ13 582 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 FADS3Q9Y5Q0 445 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
SEC61A1-202ENST00000424880 CCDC162PA2VCL2 907 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 C7orf72A4D263 438 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CCNT2O60583 730 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 BBOX1O75936 387 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 FBXO21O94952 628 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CLIC3O95833 236 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ENO3P13929 434 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CYP3A7P24462 503 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 KCNT2Q6UVM3 1135 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 SAPCD2Q86UD0 394 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 RTKN2Q8IZC4 609 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ACTRT2Q8TDY3 377 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 SLC44A1Q8WWI5 657 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ITPKCQ96DU7 683 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 NAA50Q9GZZ1 169 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CROTQ9UKG9 612 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 RNF11Q9Y3C5 154 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CSH1P0DML2 217 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CSH2P0DML3 217 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CSE1LP55060 971 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 EIF3EP60228 445 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 BNIP3Q12983 259 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 TUBB3Q13509 450 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 PPP2R5DQ14738 602 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CARTPTQ16568 116 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 SEZ6Q53EL9 994 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 SLC9A4Q6AI14 798 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 NANOGP8Q6NSW7 305 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 PGM2L1Q6PCE3 622 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 STXBP4Q6ZWJ1 553 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 MON1BQ7L1V2 547 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 EME1Q96AY2 570 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ZFRQ96KR1 1074 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 TBC1D22BQ9NU19 505 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 TJP2Q9UDY2 1190 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 GGA1Q9UJY5 639 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 A0A1W2PPW3 197 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 P4HA2O15460 535 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 DENRO43583 198 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 RFPL1O75677 317 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 GDF11O95390 407 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 IL1R1P14778 569 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 AOC1P19801 751 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 RFX1P22670 979 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms