RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 PLK2Q9NYY3 685 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 SCML2Q9UQR0 700 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 BTBD3Q9Y2F9 522 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 A0A087X0B3 334 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 A0A1B0GVT2 93 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 PENKP01210 267 aaPredicted RBP17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 C7P10643 843 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 CSNK1EP49674 416 aaKnown RBP17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 COPAP53621 1224 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 MFAP3P55082 362 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 E2F5Q15329 346 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 CRYBG2Q8N1P7 616 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 XXYLT1Q8NBI6 393 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 HPS3Q969F9 1004 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 KRT82Q9NSB4 513 aa17.64■□□□□ 0.41
CHCHD3-202ENST00000423635 KNTC1P50748 2209 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 PCDHGA12O60330 932 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 SYNCRIPO60506 623 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 AFF3P51826 1226 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 GEN1Q17RS7 908 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 BMT2Q1RMZ1 405 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 KIF19Q2TAC6 998 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 FYB2Q5VWT5 728 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 ACOT1Q86TX2 421 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 RBBP8NLQ8NC74 664 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 UCMAQ8WVF2 138 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 NMUR1Q9HB89 426 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 ZNF510Q9Y2H8 683 aa17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 MORC2Q9Y6X9 1032 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-202ENST00000423635 FAM149AA5PLN7 773 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 GOLGA8CPA6NN73 597 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 ACADMP11310 421 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 GRK6P43250 576 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 ABCG1P45844 678 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 MAP3K7CLP57077 242 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 LSM14AQ8ND56 463 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 SLC2A14Q8TDB8 520 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 SLC39A7Q92504 469 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 BHMTQ93088 406 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 PIWIL1Q96J94 861 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 LRRC27Q9C0I9 530 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 SDCBP2Q9H190 292 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 ELOVL2Q9NXB9 296 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 PPP4R2Q9NY27 417 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 SNX11Q9Y5W9 270 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 KALRNO60229 2985 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 SHROOM3Q8TF72 1996 aa17.62■□□□□ 0.41
CHCHD3-202ENST00000423635 HHLA1C9JL84 531 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 CLIC2O15247 247 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 PHACTR2O75167 634 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 C1QL1O75973 258 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 STC2O76061 302 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 CD2BP2O95400 341 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 KLKB1P03952 638 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 PRB1P04280 392 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 RARGP13631 454 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 CCDC130P13994 396 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 CHKAP35790 457 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 ORC1Q13415 861 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 ZNF234Q14588 700 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 IGSF8Q969P0 613 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 ANKRD6Q9Y2G4 727 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 SLCO1B1Q9Y6L6 691 aa17.61■□□□□ 0.41
CHCHD3-202ENST00000423635 MDM4O15151 490 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 ATXN7O15265 892 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 CYP26A1O43174 497 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 PAPSS1O43252 624 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 HLA-EP13747 358 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 GRIA4P48058 902 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 CYP2J2P51589 502 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 AP3M2P53677 418 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 CLDN10P78369 228 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 EIF4HQ15056 248 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 TEAD4Q15561 434 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 ZNF699Q32M78 642 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 GPRIN1Q7Z2K8 1008 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 UNC93AQ86WB7 457 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 C12orf56Q8IXR9 622 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 ENGASEQ8NFI3 743 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 PRORYQ9H606 182 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 PNPLA8Q9NP80 782 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 NUDT5Q9UKK9 219 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
CHCHD3-202ENST00000423635 A0A1W2PQH9 124 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 TIMM44O43615 452 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 C4BPAP04003 597 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 PRKCHP24723 683 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 PSEN1P49768 467 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms