RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH1-202ENST00000422392 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 SIGLEC10Q96LC7 697 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 DHX35Q9H5Z1 703 aaKnown RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 CORO1CQ9ULV4 474 aaPredicted RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 KLF11O14901 512 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 TGM2P21980 687 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 YY1P25490 414 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 ATICP31939 592 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 GCKP35557 465 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 PHKA2P46019 1235 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 KRT72Q14CN4 511 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 PDK2Q15119 407 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 TEX44Q53QW1 395 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 C16orf46Q6P387 395 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 UCMAQ8WVF2 138 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 YIPF3Q9GZM5 350 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 NRDE2Q9H7Z3 1164 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 VRTNQ9H8Y1 702 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 STOML1Q9UBI4 398 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.35■□□□□ 0.21
CDH1-202ENST00000422392 BCLAF3A2AJT9 711 aaKnown RBP16.35■□□□□ 0.21
CDH1-202ENST00000422392 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 A6NHS1 94 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 MCF2P10911 925 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 GMPRP36959 345 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 OCRLQ01968 901 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 TSNAXIP1Q2TAA8 658 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 EXOC8Q8IYI6 725 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 RBM15BQ8NDT2 890 aaKnown RBP16.35■□□□□ 0.21
CDH1-202ENST00000422392 SHKBP1Q8TBC3 707 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 SCG3Q8WXD2 468 aaKnown RBP16.35■□□□□ 0.21
CDH1-202ENST00000422392 KIF12Q96FN5 646 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 MMP19Q99542 508 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 TUBB6Q9BUF5 446 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 CEP41Q9BYV8 373 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 MAF1Q9H063 256 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 ASB7Q9H672 318 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 IL1RAPL1Q9NZN1 696 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
CDH1-202ENST00000422392 RPL26L1Q9UNX3 145 aaKnown RBP16.35■□□□□ 0.21
CDH1-202ENST00000422392 CAPN14A8MX76 684 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 LYPLA1O75608 230 aaPredicted RBP16.34■□□□□ 0.21
CDH1-202ENST00000422392 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
CDH1-202ENST00000422392 VHLP40337 213 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 ADGRF2Q8IZF7 708 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 ANKRD27Q96NW4 1050 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 KCNK4Q9NYG8 393 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 SIRPGQ9P1W8 387 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 OTOFQ9HC10 1997 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 MAP3K13O43283 966 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 KRT38O76015 456 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 UBAP2LQ14157 1087 aaKnown RBP16.34■□□□□ 0.21
CDH1-202ENST00000422392 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 LMNTD2Q8IXW0 634 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 C7orf31Q8N865 590 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 GSDMBQ8TAX9 411 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 C7orf26Q96N11 449 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 RILPQ96NA2 401 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 PGLYRP2Q96PD5 576 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
CDH1-202ENST00000422392 SPDYE5A6NIY4 337 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 TRDMT1O14717 391 aaKnown RBP16.33■□□□□ 0.21
CDH1-202ENST00000422392 LIN7AO14910 233 aaPredicted RBP16.33■□□□□ 0.21
CDH1-202ENST00000422392 ZNF286BP0CG31 522 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 ACADSP16219 412 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 CCNFP41002 786 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 RBP5P82980 135 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 LGSNQ5TDP6 509 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 CASC4Q6P4E1 433 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 LRRC74BQ6ZQY2 392 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 PYROXD2Q8N2H3 581 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 STKLD1Q8NE28 680 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 NLRP7Q8WX94 980 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 STMN2Q93045 179 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 EBNA1BP2Q99848 306 aaKnown RBP16.33■□□□□ 0.21
CDH1-202ENST00000422392 GINS2Q9Y248 185 aa16.33■□□□□ 0.21
CDH1-202ENST00000422392 WDR27A2RRH5 827 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 MEI4A8MW99 385 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 PRR5-ARHGAP8B1AHC4 643 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 IL1BP01584 269 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 L1CAMP32004 1257 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 ARHGAP8P85298 464 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 TNFAIP2Q03169 654 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 GLRA4Q5JXX5 417 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 BSPRYQ5W0U4 402 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 ATG16L1Q676U5 607 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 MOB2Q70IA6 237 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 CCDC185Q8N715 623 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms