RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ARCQ7LC44 396 aa22■■□□□ 1.11
USP48-205ENST00000421625 DEFB107AQ8IZN7 70 aa22■■□□□ 1.11
USP48-205ENST00000421625 MAD1L1Q9Y6D9 718 aa22■■□□□ 1.11
USP48-205ENST00000421625 LOC100653049A0A140TA62 436 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 SMIM31A0A1B0GVY4 71 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 CAPN8A6NHC0 703 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 H3BNX3 289 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 KRT34O76011 436 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 DPEP1P16444 411 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 RAP1GAPP47736 663 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 WDR78Q5VTH9 848 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 ACTRT2Q8TDY3 377 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 PAK5Q9P286 719 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 TMCO1Q9UM00 188 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 KIAA1217Q5T5P2 1943 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 FGF3P11487 239 aaPredicted RBP21.99■■□□□ 1.11
USP48-205ENST00000421625 RBL1P28749 1068 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 YWHAEP62258 255 aaKnown RBP21.99■■□□□ 1.11
USP48-205ENST00000421625 BTKQ06187 659 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 MAP7Q14244 749 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 VWA5B1Q5TIE3 1220 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 LCA5Q86VQ0 697 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 PNPOQ9NVS9 261 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 GALNT8Q9NY28 637 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 SLC17A6Q9P2U8 582 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 HSFX1Q9UBD0 423 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 PCDHGB4Q9UN71 923 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 PCDHGB5Q9Y5G0 923 aa21.99■■□□□ 1.11
USP48-205ENST00000421625 HNRNPRO43390 633 aaKnown RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 KLHL2O95198 593 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 ITGAXP20702 1163 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 SLC1A6P48664 564 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 XIAPP98170 497 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 TLR1Q15399 786 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 TMC7Q7Z402 723 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 JADE3Q92613 823 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 SDCBP2Q9H190 292 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 ITGA11Q9UKX5 1188 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 EMCNQ9ULC0 261 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 INPP5FQ9Y2H2 1132 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 VILLO15195 856 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 RGS20O76081 388 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 ACTR2P61160 394 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 BAATQ14032 418 aaPredicted RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 ICA1LQ8NDH6 482 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 JPH1Q9HDC5 661 aaPredicted RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 HEY1Q9Y5J3 304 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 NR3C2P08235 984 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 ITGA2BP08514 1039 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 ASPAP45381 313 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 MYBPC3Q14896 1274 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 MAP3K21Q5TCX8 1036 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 RBM44Q6ZP01 1051 aaKnown RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 FRMD7Q6ZUT3 714 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 VSIG10LQ86VR7 867 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 NCAPG2Q86XI2 1143 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 BRSK2Q8IWQ3 736 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 UNC5BQ8IZJ1 945 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 TFB1MQ8WVM0 346 aaKnown RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 PRICKLE1Q96MT3 831 aaPredicted RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 PACSIN3Q9UKS6 424 aa21.98■■□□□ 1.11
USP48-205ENST00000421625 SCAF8Q9UPN6 1271 aaKnown RBP21.98■■□□□ 1.11
USP48-205ENST00000421625 FAM159BA6NKW6 160 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 ATP9BO43861 1147 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 IDH3AP50213 366 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 CCDC33Q8N5R6 958 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 NXF1Q9UBU9 619 aaKnown RBP21.97■■□□□ 1.11
USP48-205ENST00000421625 PPP1R1BQ9UD71 204 aaPredicted RBP21.97■■□□□ 1.11
USP48-205ENST00000421625 DKC1O60832 514 aaKnown RBP eCLIP21.97■■□□□ 1.11
USP48-205ENST00000421625 ZBTB7AO95365 584 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 N4BP2L1Q5TBK1 243 aaPredicted RBP21.97■■□□□ 1.11
USP48-205ENST00000421625 PDPK2PQ6A1A2 396 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 CYP4V2Q6ZWL3 525 aaPredicted RBP21.97■■□□□ 1.11
USP48-205ENST00000421625 WDR49Q8IV35 697 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 PHTF2Q8N3S3 785 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 DEPDC1BQ8WUY9 529 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 APBB2Q92870 758 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 LENG1Q96BZ8 264 aaPredicted RBP21.97■■□□□ 1.11
USP48-205ENST00000421625 FAM210AQ96ND0 272 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 PORCNQ9H237 461 aa21.97■■□□□ 1.11
USP48-205ENST00000421625 CCND2P30279 289 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 ARRB2P32121 409 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 ABCD1P33897 745 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 NAMPTP43490 491 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 BAG6P46379 1132 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 DEUP1Q05D60 604 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 TBL3Q12788 808 aaKnown RBP21.96■■□□□ 1.11
USP48-205ENST00000421625 TMEM130Q8N3G9 435 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 GPRASP2Q96D09 838 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 DGCR14Q96DF8 476 aaKnown RBP21.96■■□□□ 1.11
USP48-205ENST00000421625 EPB41L1Q9H4G0 881 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 DTNAQ9Y4J8 743 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 RIPK3Q9Y572 518 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 hCG_2014768A0A024R1R8 64 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 CASQ2O14958 399 aaPredicted RBP21.96■■□□□ 1.11
USP48-205ENST00000421625 TFAP2AP05549 437 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 NCF2P19878 526 aaPredicted RBP21.96■■□□□ 1.11
USP48-205ENST00000421625 FDFT1P37268 417 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 SNAPC2Q13487 334 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms