RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 FAM124AQ86V42 546 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 TOP6BLQ8N6T0 577 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 HPS3Q969F9 1004 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 SGF29Q96ES7 293 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 FBRSQ9HAH7 460 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 GDAP2Q9NXN4 497 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 PLEKHB1Q9UF11 243 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-206ENST00000420746 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 ITPR3Q14573 2671 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 HNRNPDLO14979 420 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 EFSO43281 561 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 OPA1O60313 960 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 GREM1O60565 184 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CSO75390 466 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 GP1BAP07359 652 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 FAM87AP0C7U9 286 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 BDNFP23560 247 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 ELAVL4P26378 380 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CD38P28907 300 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CCT6AP40227 531 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 ZNF211Q13398 564 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 ORC2Q13416 577 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CAMK2GQ13555 558 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CCDC142Q17RM4 750 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 PRAMEF14Q5SWL7 426 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 HECTD3Q5T447 861 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 KIAA0895LQ68EN5 471 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 USP53Q70EK8 1073 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 ADGRF2Q8IZF7 708 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 LRRC52Q8N7C0 313 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 NSUN7Q8NE18 718 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 EXTL1Q92935 676 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 MYLPFQ96A32 169 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 SLC6A18Q96N87 628 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 MSTO1Q9BUK6 570 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 RUSC1Q9BVN2 902 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 TRIM9Q9C026 710 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 EPN3Q9H201 632 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 GJB4Q9NTQ9 266 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 DDX19AQ9NUU7 478 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 GEMIN8Q9NWZ8 242 aaKnown RBP9.55□□□□□ -0.88
TRIM39-206ENST00000420746 CDH9Q9ULB4 789 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 KIAA1024Q9UPX6 916 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
TRIM39-206ENST00000420746 A0A1W2PR77 199 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 F8VP50 259 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 GJB6O95452 261 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 WNT1P04628 370 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 PRKCHP24723 683 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 PSMA5P28066 241 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 CASRP41180 1078 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 DUSP3P51452 185 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 FOSBP53539 338 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 NCKAP1LP55160 1127 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 NXPH1P58417 271 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 ZNF234Q14588 700 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 ZSCAN23Q3MJ62 389 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 DPH6Q7L8W6 267 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 OSTM1Q86WC4 334 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 TICAM1Q8IUC6 712 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 CCDC83Q8IWF9 413 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 RBBP8NLQ8NC74 664 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 SPATA20Q8TB22 786 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 SYT15Q9BQS2 421 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 ADNPQ9H2P0 1102 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
TRIM39-206ENST00000420746 SATB2Q9UPW6 733 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 SNX14Q9Y5W7 946 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 CKAP5Q14008 2032 aa9.54□□□□□ -0.88
TRIM39-206ENST00000420746 TCHHQ07283 1943 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 C10orf142B7Z368 130 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 RTN3O95197 1032 aaPredicted RBP9.53□□□□□ -0.88
TRIM39-206ENST00000420746 IL18RAPO95256 599 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 EPHX1P07099 455 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 CKMT1AP12532 417 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 YWHAQP27348 245 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 TRAPPC10P48553 1259 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM39-206ENST00000420746 MFAP3P55082 362 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 BNIP3Q12983 259 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 ISXQ2M1V0 245 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 SLC45A4Q5BKX6 768 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 HIST2H2BCQ6DN03 193 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 TPGS1Q6ZTW0 290 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 USP30Q70CQ3 517 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 LIMS2Q7Z4I7 341 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 ARL14Q8N4G2 192 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 WASF1Q92558 559 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 FBXO32Q969P5 355 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 KCND2Q9NZV8 630 aa9.53□□□□□ -0.88
TRIM39-206ENST00000420746 LARSQ9P2J5 1176 aaKnown RBP9.53□□□□□ -0.88
TRIM39-206ENST00000420746 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms