RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 GJB7Q6PEY0 223 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 CACNA2D4Q7Z3S7 1137 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 DENND1CQ8IV53 801 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 FMNL3Q8IVF7 1028 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 FAM160A2Q8N612 972 aaPredicted RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 EDEM1Q92611 657 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 AGO1Q9UL18 857 aaKnown RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 STARD13Q9Y3M8 1113 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 HBS1LQ9Y450 684 aaKnown RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 SGK1O00141 431 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 PIK3R2O00459 728 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 LRP3O75074 770 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 FBXO21O94952 628 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 TGM1P22735 817 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 PON1P27169 355 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 GPD2P43304 727 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 RPL34P49207 117 aaKnown RBP17.22■□□□□ 0.35
LINC00404-201ENST00000418660 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 TMEM92Q6UXU6 159 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 TRMT11Q7Z4G4 463 aaKnown RBP17.22■□□□□ 0.35
LINC00404-201ENST00000418660 CPXM2Q8N436 756 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 ZNF606Q8WXB4 792 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 FBXO10Q9UK96 956 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 EP300Q09472 2414 aaPredicted RBP17.22■□□□□ 0.35
LINC00404-201ENST00000418660 MYOFQ9NZM1 2061 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 GPR179Q6PRD1 2367 aa17.22■□□□□ 0.35
LINC00404-201ENST00000418660 BECN2A8MW95 431 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 THAP12O43422 761 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ADAM23O75077 832 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 PENKP01210 267 aaPredicted RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 CISD3P0C7P0 127 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 GNA15P30679 374 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ACADSBP45954 432 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ID4P47928 161 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 HARS2P49590 506 aaKnown RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 DGKGP49619 791 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 APBA1Q02410 837 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 SPEM2Q0P670 501 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 VWA3BQ502W6 1294 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 FYB2Q5VWT5 728 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 DENND1BQ6P3S1 775 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 KBTBD6Q86V97 674 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 RASSF3Q86WH2 238 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 FAM217AQ8IXS0 508 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ZNF513Q8N8E2 541 aaPredicted RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 STK32AQ8WU08 396 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 SHC3Q92529 594 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 GOLGA1Q92805 767 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 BHMTQ93088 406 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 LOXL4Q96JB6 756 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ZC3H10Q96K80 434 aaKnown RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 MIS12Q9H081 205 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 POLMQ9NP87 494 aaPredicted RBP17.21■□□□□ 0.35
LINC00404-201ENST00000418660 PARD6AQ9NPB6 346 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ZDHHC4Q9NPG8 344 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 PLK2Q9NYY3 685 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 SFMBT1Q9UHJ3 866 aa17.21■□□□□ 0.35
LINC00404-201ENST00000418660 ZNF292O60281 2723 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 LTFP02788 710 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 CYBBP04839 570 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
LINC00404-201ENST00000418660 HNRNPLP14866 589 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00404-201ENST00000418660 USP39Q53GS9 565 aaKnown RBP17.2■□□□□ 0.34
LINC00404-201ENST00000418660 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 ANO7Q6IWH7 933 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 TOGARAM2Q6ZUX3 1019 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 SCUBE3Q8IX30 993 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 P2RY11Q96G91 374 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 SLC4A5Q9BY07 1137 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 HCN2Q9UL51 889 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 SLC27A6Q9Y2P4 619 aa17.2■□□□□ 0.34
LINC00404-201ENST00000418660 PRRT4C9JH25 899 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 SART1O43290 800 aaKnown RBP17.19■□□□□ 0.34
LINC00404-201ENST00000418660 LATS1O95835 1130 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 NTSR1P30989 418 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 USP8P40818 1118 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
LINC00404-201ENST00000418660 MDGA1Q8NFP4 955 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 TPSD1Q9BZJ3 242 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 ACP6Q9NPH0 428 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 SAMSN1Q9NSI8 373 aaKnown RBP17.19■□□□□ 0.34
LINC00404-201ENST00000418660 STOML2Q9UJZ1 356 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
LINC00404-201ENST00000418660 KCNJ18B7U540 433 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 DCLK1O15075 740 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms