RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IKBKEQ14164 716 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 KBTBD12Q3ZCT8 623 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ATP6AP1LQ52LC2 224 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 FBXW10Q5XX13 1052 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ROPN1BQ9BZX4 212 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ROPN1Q9HAT0 212 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-205ENST00000418258 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 INSRRP14616 1297 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 THOP1P52888 689 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 ZNF473Q8WTR7 871 aaKnown RBP11.52□□□□□ -0.56
PTCH1-205ENST00000418258 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 SNCAIPQ9Y6H5 919 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 CCNT2O60583 730 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 GYS1P13807 737 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 AKR1A1P14550 325 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 CPA2P48052 419 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF544Q6NX49 715 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 LRRC6Q86X45 466 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 CAAP1Q9H8G2 361 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 RGS18Q9NS28 235 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 SMIM22K7EJ46 135 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 MED24O75448 989 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 SKP1P63208 163 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 XRCC4Q13426 336 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 MARC1Q5VT66 337 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 RBM22Q9NW64 420 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 GLRA3O75311 464 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 SREBF1P36956 1147 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 ERMARDQ5T6L9 678 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 TRPM8Q7Z2W7 1104 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 PALB2Q86YC2 1186 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 LPCAT1Q8NF37 534 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 NSL1Q96IY1 281 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 CBWD1Q9BRT8 395 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 TRIM66O15016 1216 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 MYL6P60660 151 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 POLR2LP62875 67 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 ILDR2Q71H61 639 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 USP7Q93009 1102 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 PIK3C2BO00750 1634 aa11.52□□□□□ -0.57
PTCH1-205ENST00000418258 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
PTCH1-205ENST00000418258 SERPINF2P08697 491 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TGFB3P10600 412 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TRPC4APQ8TEL6 797 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CNPY3Q9BT09 278 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 RAD54BQ9Y620 910 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 A0A087X0T9 212 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 RBAK-RBAKDNI3L0D1 243 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CLTBP09497 229 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CYP2F1P24903 491 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NFIAQ12857 509 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MTA1Q13330 715 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 AGBL2Q5U5Z8 902 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SEL1L3Q68CR1 1132 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CAPRIN2Q6IMN6 1127 aaKnown RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 C16orf59Q7L2K0 433 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 BBS4Q96RK4 519 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CCT8L2Q96SF2 557 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CTNNAL1Q9UBT7 734 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 IFNA14P01570 189 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF23P17027 643 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NUP62P37198 522 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CHRNB3Q05901 458 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TTC33Q6PID6 262 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ARID3BQ8IVW6 561 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SH3GL1Q99961 368 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PRRG3Q9BZD7 231 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 N6AMT1Q9Y5N5 214 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MED14O60244 1454 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CNPP09543 421 aaKnown RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MLH1P40692 756 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PPP4CP60510 307 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PPIL2Q13356 520 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NR6A1Q15406 480 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TERF2Q15554 542 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms