RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 RABGGTAQ92696 567 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 USP6NLQ92738 828 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 LENG9Q96B70 501 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 CYFIP2Q96F07 1278 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 MTMR9Q96QG7 549 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 MXRA8Q9BRK3 442 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 TMEM60Q9H2L4 133 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 KCNMB3Q9NPA1 279 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 KMT5AQ9NQR1 393 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 LMBRD1Q9NUN5 540 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 NCDNQ9UBB6 729 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 GJD2Q9UKL4 321 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 PCDHA7Q9UN72 937 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 SRPRBQ9Y5M8 271 aaKnown RBP6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 UBIAD1Q9Y5Z9 338 aa6.51□□□□□ -1.37
NIFKP3-201ENST00000417799 GOLGA6L4A6NEF3 574 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 NRP1O14786 923 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 MSH4O15457 936 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ALDH2P05091 517 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 MYL1P05976 194 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 HOXC6P09630 235 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 OR52Z1P0C646 297 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ARP10275 920 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 PTMSP20962 102 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 CTGFP29279 349 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 PRPHP41219 470 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 RGS2P41220 211 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ADAM8P78325 824 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 SETQ01105 290 aaPredicted RBP6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 CALCRLQ16602 461 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 THEMIS2Q5TEJ8 643 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ADALQ6DHV7 355 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 MAMDC4Q6UXC1 1216 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 RSPH3Q86UC2 560 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 LRRC56Q8IYG6 542 aaPredicted RBP6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 LGI4Q8N135 537 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 DNAJC5GQ8N7S2 189 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ETNPPLQ8TBG4 499 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 SOCS4Q8WXH5 440 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 CFHR4Q92496 578 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 HAS1Q92839 578 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 RAB24Q969Q5 203 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 FAM20AQ96MK3 541 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 INPP4AQ96PE3 977 aaPredicted RBP6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 ARHGAP39Q9C0H5 1083 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 LANCL2Q9NS86 450 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 FBXO2Q9UK22 296 aaPredicted RBP6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 DDX49Q9Y6V7 483 aaKnown RBP6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 THSD7BQ9C0I4 1608 aa6.5□□□□□ -1.37
NIFKP3-201ENST00000417799 MYH7BA7E2Y1 1941 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 VWA3AA6NCI4 1184 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 IPO5O00410 1097 aaKnown RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 SLC16A6O15403 523 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ADCY6O43306 1168 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 SLC26A4O43511 780 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 UBXN7O94888 489 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 FTLP02792 175 aaPredicted RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CYP2B6P20813 491 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CMA1P23946 247 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CFPP27918 469 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 HOXD10P28358 340 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ICAM3P32942 547 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 PTPN7P35236 360 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 LONP1P36776 959 aaKnown RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CASRP41180 1078 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 RAC3P60763 192 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 UBE2HP62256 183 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 PDIA5Q14554 519 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ARHGEF6Q15052 776 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 IL17AQ16552 155 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 TMEM266Q2M3C6 531 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 MAP9Q49MG5 647 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ARHGEF18Q6ZSZ5 1173 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 SEPT14Q6ZU15 432 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ARMCX2Q7L311 632 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 OVCH2Q7RTZ1 564 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 OR5M3Q8NGP4 307 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 GJA10Q969M2 543 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 RGMAQ96B86 450 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ERO1AQ96HE7 468 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CDHR1Q96JP9 859 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CLPTM1LQ96KA5 538 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 RIT2Q99578 217 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 CGRRF1Q99675 332 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 WDR11Q9BZH6 1224 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 SENP6Q9GZR1 1112 aaPredicted RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 C12orf65Q9H3J6 166 aaKnown RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 LDAHQ9H6V9 325 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 FAM204AQ9H8W3 233 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 ARNT2Q9HBZ2 717 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 AGO4Q9HCK5 861 aaKnown RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 MAN1C1Q9NR34 630 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 PCDHA12Q9UN75 941 aa6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 RBBP6Q7Z6E9 1792 aaKnown RBP6.49□□□□□ -1.37
NIFKP3-201ENST00000417799 TCHHQ07283 1943 aa6.48□□□□□ -1.37
NIFKP3-201ENST00000417799 MYH15Q9Y2K3 1946 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms