RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 VANGL2Q9ULK5 521 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 ATG7O95352 703 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 GEMP55040 296 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 PKN1Q16512 942 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 MRPS26Q9BYN8 205 aaKnown RBP12.37□□□□□ -0.43
UBR4-205ENST00000417040 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 COMMD8Q9NX08 183 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 TAS2R14Q9NYV8 317 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 MKL2Q9ULH7 1088 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 AP4E1Q9UPM8 1137 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 C2CD2LO14523 706 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 TSPAN3O60637 253 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 MYL6P60660 151 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 VEPH1Q14D04 833 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 INAQ16352 499 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
UBR4-205ENST00000417040 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 RXFP2Q8WXD0 754 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 IQGAP3Q86VI3 1631 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TIMM44O43615 452 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 AHCYL1O43865 530 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CSF1RP07333 972 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 OR1G1P47890 313 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 NPTX2P47972 431 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ATP12AP54707 1039 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CNGA2Q16280 664 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 DDR2Q16832 855 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 OLFML1Q6UWY5 402 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 RBM44Q6ZP01 1051 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 ADGRA1Q86SQ6 560 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 VPS37AQ8NEZ2 397 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ZMYM5Q9UJ78 669 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TRIM13O60858 407 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CNOT3O75175 753 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 VTNP04004 478 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 MPP3Q13368 585 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 STK32CQ86UX6 486 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TMEM39BQ9GZU3 492 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 DNAJC18Q9H819 358 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CD4P01730 458 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CAPZA2P47755 286 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 RAD23AP54725 363 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 BOLA3Q53S33 107 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 POLNQ7Z5Q5 900 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ACTL9Q8TC94 416 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 PSMD11O00231 422 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CCNT2O60583 730 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 PLA2G6O60733 806 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 SH3BGRLO75368 114 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CYBBP04839 570 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CHN2P52757 468 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CRADDP78560 199 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 SP8Q8IXZ3 490 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ZNF614Q8N883 585 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 WDR60Q8WVS4 1066 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 NACC2Q96BF6 587 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 FAR2Q96K12 515 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 TMEM150BA6NC51 233 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 CCDC154A6NI56 674 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 STX7O15400 261 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 JCHAINP01591 159 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 EFL1Q7Z2Z2 1120 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 FAM120BQ96EK7 910 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 UBE2OQ9C0C9 1292 aaKnown RBP12.36□□□□□ -0.43
UBR4-205ENST00000417040 NT5MQ9NPB1 228 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
UBR4-205ENST00000417040 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 CHKAP35790 457 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 KRR1Q13601 381 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 CHMP1BQ7LBR1 199 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ALYREFQ86V81 257 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms