RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 C12orf56Q8IXR9 622 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 CADM4Q8NFZ8 388 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 GOLGA5Q8TBA6 731 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 HNRNPLLQ8WVV9 542 aaKnown RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 DNASE2BQ8WZ79 361 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 PRCCQ92733 491 aaPredicted RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 SIPA1Q96FS4 1042 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 DNAI2Q9GZS0 605 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 SDCBP2Q9H190 292 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 MAGEF1Q9HAY2 307 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 SLC39A2Q9NP94 309 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ITM2CQ9NQX7 267 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 TM7SF3Q9NS93 570 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 USP36Q9P275 1121 aaKnown RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 SCML2Q9UQR0 700 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ZNF510Q9Y2H8 683 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 PCDHA5Q9Y5H7 936 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 PTPRBP23467 1997 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 A0A1W2PQH9 124 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 LRRIQ3A6PVS8 624 aaPredicted RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 MDM4O15151 490 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SPTLC2O15270 562 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 FLRT2O43155 660 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 STX6O43752 255 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CILPO75339 1184 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 KIF20AO95235 890 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CYBBP04839 570 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CISD3P0C7P0 127 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 ZNF883P0CG24 379 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 RALAP11233 206 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CHKAP35790 457 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 IL12RB1P42701 662 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 PSEN1P49768 467 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 TPMTP51580 245 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SUZ12Q15022 739 aaKnown RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 KNOP1Q1ED39 458 aaKnown RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SGSM1Q2NKQ1 1148 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CNNM4Q6P4Q7 775 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CLEC20AQ6ZU45 233 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SLCO6A1Q86UG4 719 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 TMPRSS6Q8IU80 811 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CRYBG2Q8N1P7 616 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 C12orf29Q8N999 325 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 RHBDD1Q8TEB9 315 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 PARD3BQ8TEW8 1205 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SNX19Q92543 992 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 TAF4BQ92750 862 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 CDK5RAP1Q96SZ6 601 aaKnown RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 CDC6Q99741 560 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 C7orf25Q9BPX7 421 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 NUP58Q9BVL2 599 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 MKRN2Q9H000 416 aaKnown RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.55□□□□□ -0.72
MDC1-202ENST00000416571 OSER1Q9NX31 292 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 KIAA1522Q9P206 1035 aaPredicted RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 HMGXB4Q9UGU5 601 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 EIF2B4Q9UI10 523 aaKnown RBP10.55□□□□□ -0.72
MDC1-202ENST00000416571 NUDT5Q9UKK9 219 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 SLC27A6Q9Y2P4 619 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 RAXQ9Y2V3 346 aa10.55□□□□□ -0.72
MDC1-202ENST00000416571 ITPR1Q14643 2758 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 GOLGA8CPA6NN73 597 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 METTL12A8MUP2 240 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 CBFA2T3O75081 653 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 STC2O76061 302 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
MDC1-202ENST00000416571 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
MDC1-202ENST00000416571 EPHX1P07099 455 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 MFAP3P55082 362 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 COG7P83436 770 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 HLA-BQ31612 363 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 SOWAHCQ53LP3 525 aaPredicted RBP10.54□□□□□ -0.72
MDC1-202ENST00000416571 Q6ZNB5 142 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 GALNT15Q8N3T1 639 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 ENGASEQ8NFI3 743 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 LRIG1Q96JA1 1093 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
MDC1-202ENST00000416571 DCLK3Q9C098 648 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 CIPCQ9C0C6 399 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 IL21RQ9HBE5 538 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 PNPLA8Q9NP80 782 aa10.54□□□□□ -0.72
MDC1-202ENST00000416571 THAP10Q9P2Z0 257 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms