RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TACC1O75410 805 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 EPHX1P07099 455 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 JUPP14923 745 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ADORA2BP29275 332 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ACSL1P33121 698 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 GRK6P43250 576 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CASP4P49662 377 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 AFF3P51826 1226 aaKnown RBP9.87□□□□□ -0.83
LINC01238-201ENST00000416204 COPAP53621 1224 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 MFAP3P55082 362 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CEBPZQ03701 1054 aaKnown RBP9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CCDC173Q0VFZ6 552 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ZNF234Q14588 700 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
LINC01238-201ENST00000416204 PTPRNQ16849 979 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 RRAGBQ5VZM2 374 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 DBX2Q6ZNG2 339 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 LRRC69Q6ZNQ3 347 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SV2BQ7L1I2 683 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 WDR49Q8IV35 697 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 FUKQ8N0W3 1084 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CADM4Q8NFZ8 388 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SLC2A14Q8TDB8 520 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 OVCA2Q8WZ82 227 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 KIF2CQ99661 725 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ARID3AQ99856 593 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 NUP58Q9BVL2 599 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SDCBP2Q9H190 292 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 NMUR1Q9HB89 426 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 TM9SF3Q9HD45 589 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 MARK1Q9P0L2 795 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 HMGXB4Q9UGU5 601 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 LSM7Q9UK45 103 aaKnown RBP9.87□□□□□ -0.83
LINC01238-201ENST00000416204 PCDHGB2Q9Y5G2 931 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CLIC4Q9Y696 253 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 KNL1Q8NG31 2342 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 ATP8B3O60423 1300 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 MUC22E2RYF6 1773 aaPredicted RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 A0A087X0B3 334 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 GFRA2O00451 464 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 KLKB1P03952 638 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 OXTRP30559 389 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 HOXD13P35453 343 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 ATP5C1P36542 298 aaKnown RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 TUBP50607 506 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 CCT8P50990 548 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 CXADRP78310 365 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 TARDBPQ13148 414 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 TRPC3Q13507 836 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 SNRNP35Q16560 246 aaKnown RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 C10orf120Q5SQS8 335 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 SNX30Q5VWJ9 437 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 PCSK4Q6UW60 755 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 ADAT2Q7Z6V5 191 aaKnown RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 CYB5D2Q8WUJ1 264 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 NXPE2Q96DL1 559 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 SMARCD1Q96GM5 515 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 NAF1Q96HR8 494 aaKnown RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 CGRRF1Q99675 332 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 THAP10Q9P2Z0 257 aaPredicted RBP9.86□□□□□ -0.83
LINC01238-201ENST00000416204 DNMT3LQ9UJW3 386 aa9.86□□□□□ -0.83
LINC01238-201ENST00000416204 NAV2Q8IVL1 2488 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 NUMA1Q14980 2115 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 FAM47DPA6NHR8 397 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 PHACTR2O75167 634 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 STC2O76061 302 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 RARGP13631 454 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 CYP24A1Q07973 514 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 GOLGA8FQ08AF8 430 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 GOLGA8DPQ0D2H9 430 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 BIRC3Q13489 604 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 SURF1Q15526 300 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 TEAD4Q15561 434 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 FYB2Q5VWT5 728 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 TMEM215Q68D42 235 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 SERPINA13PQ6UXR4 307 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 Q6ZNB5 142 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
LINC01238-201ENST00000416204 NELFCDQ8IXH7 590 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 PDILTQ8N807 584 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 BIRC7Q96CA5 298 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 CNDP2Q96KP4 475 aaKnown RBP9.85□□□□□ -0.83
LINC01238-201ENST00000416204 GZF1Q9H116 711 aaPredicted RBP9.85□□□□□ -0.83
LINC01238-201ENST00000416204 XYLT2Q9H1B5 865 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 LHX5Q9H2C1 402 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 MTG2Q9H4K7 406 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 TLR8Q9NR97 1041 aaKnown RBP9.85□□□□□ -0.83
LINC01238-201ENST00000416204 OLFML3Q9NRN5 406 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 ELOVL2Q9NXB9 296 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 IL37Q9NZH6 218 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 STK17AQ9UEE5 414 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 CCDC39Q9UFE4 941 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 NAGPAQ9UK23 515 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.85□□□□□ -0.83
LINC01238-201ENST00000416204 KIF3AQ9Y496 699 aa9.85□□□□□ -0.83
LINC01238-201ENST00000416204 NFE2L3Q9Y4A8 694 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms