RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DGKGP49619 791 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 TTI2Q6NXR4 508 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 NELFBQ8WX92 580 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 ULBP1Q9BZM6 244 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 OLA1Q9NTK5 396 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 FBXO10Q9UK96 956 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 HCN2Q9UL51 889 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 SLC12A8A0AV02 714 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 PRRT4C9JH25 899 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 TULP2O00295 520 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 MAP3K13O43283 966 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 PAEPP09466 180 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 SETSIPP0DME0 302 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 HOXB2P14652 356 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 CORO1AP31146 461 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 DHPSP49366 369 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 MORC3Q14149 939 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 PPM1JQ5JR12 505 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 STPG1Q5TH74 334 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 EGFLAMQ63HQ2 1017 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 LPCAT2Q7L5N7 544 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 CYP2U1Q7Z449 544 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 UBA3Q8TBC4 463 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 RLN3Q8WXF3 142 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 KCTD13Q8WZ19 329 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 RXFP3Q9NSD7 469 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 PLK2Q9NYY3 685 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 CIZ1Q9ULV3 898 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 PCDHB4Q9Y5E5 795 aa18.43■□□□□ 0.54
PDLIM2-208ENST00000416159 O00370 1275 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 GNA14O95837 355 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 PENKP01210 267 aaPredicted RBP18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 CYBBP04839 570 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 BMP6P22004 513 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 WASP42768 502 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 MAP7D1Q3KQU3 841 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 SPDYCQ5MJ68 293 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 RNF43Q68DV7 783 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 TMEM270Q6UE05 265 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 LCLAT1Q6UWP7 414 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 CHPFQ8IZ52 775 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 SCML4Q8N228 414 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 PPM1KQ8N3J5 372 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 BHMTQ93088 406 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 PLD4Q96BZ4 506 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 SLC27A6Q9Y2P4 619 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 GON4LQ3T8J9 2241 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 NCOR2Q9Y618 2525 aa18.42■□□□□ 0.54
PDLIM2-208ENST00000416159 CNOT1A5YKK6 2376 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 GFRA2O00451 464 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 TM4SF5O14894 197 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 GADD45BO75293 160 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 GABRG2P18507 467 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 ADIGQ0VDE8 80 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 STILQ15468 1287 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 CNGA2Q16280 664 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 PKDCCQ504Y2 493 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 FYB2Q5VWT5 728 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 TCEAL6Q6IPX3 200 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 BHLHA9Q7RTU4 235 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 DENND1CQ8IV53 801 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 CPXM2Q8N436 756 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 EHBP1Q8NDI1 1231 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 RNF139Q8WU17 664 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 NDRG1Q92597 394 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 TCEAL3Q969E4 200 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 ACOX2Q99424 681 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 CNGB3Q9NQW8 809 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 CTNND2Q9UQB3 1225 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 PLXND1Q9Y4D7 1925 aa18.41■□□□□ 0.54
PDLIM2-208ENST00000416159 A0A1W2PQF6 199 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 BIN1O00499 593 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 ADRB1P08588 477 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 DPP6P42658 865 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 STX17P56962 302 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 PAK1Q13153 545 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 E2F5Q15329 346 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 TRIP4Q15650 581 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 BSPRYQ5W0U4 402 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 SLC36A4Q6YBV0 504 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 FMNL3Q8IVF7 1028 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 UCMAQ8WVF2 138 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 TFAP2BQ92481 460 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 PIGKQ92643 395 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 GABRG3Q99928 467 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 EDEM2Q9BV94 578 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 ABCC13Q9NSE7 274 aa18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 HBS1LQ9Y450 684 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-208ENST00000416159 DNAH14Q0VDD8 3507 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 RNF225M0QZC1 329 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 NPC1O15118 1278 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms