RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ZNF576Q9H609 170 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 TLE6Q9H808 572 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 CLIC5Q9NZA1 410 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 CEP104O60308 925 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 TLR5O60602 858 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 ZMYND10O75800 440 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 KRT1P04264 644 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 ZC3H12AQ5D1E8 599 aaKnown RBP10.08□□□□□ -0.8
RIF1-202ENST00000414861 C10orf120Q5SQS8 335 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 ITIH5Q86UX2 942 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 RNF139Q8WU17 664 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 PLEKHA4Q9H4M7 779 aa10.08□□□□□ -0.8
RIF1-202ENST00000414861 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.08□□□□□ -0.8
RIF1-202ENST00000414861 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.08□□□□□ -0.8
RIF1-202ENST00000414861 C2orf78A6NCI8 922 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 C3orf70A6NLC5 250 aaPredicted RBP10.07□□□□□ -0.8
RIF1-202ENST00000414861 F11P03951 625 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 KRT7P08729 469 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 PSEN1P49768 467 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 KCNC3Q14003 757 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 HADHQ16836 314 aaKnown RBP10.07□□□□□ -0.8
RIF1-202ENST00000414861 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 SNX30Q5VWJ9 437 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 MIB1Q86YT6 1006 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 OVCA2Q8WZ82 227 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
RIF1-202ENST00000414861 CORO1BQ9BR76 489 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 TTYH1Q9H313 450 aaPredicted RBP10.07□□□□□ -0.8
RIF1-202ENST00000414861 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
RIF1-202ENST00000414861 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 TCRBV7S2A1N4TA0A589 114 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 RALAP11233 206 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 DESP17661 470 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 CCR2P41597 374 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 CXCR3P49682 368 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 ZFYVE27Q5T4F4 411 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 MFSD7Q6UXD7 560 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 PYROXD2Q8N2H3 581 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 RASGEF1CQ8N431 466 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 PDZD8Q8NEN9 1154 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 EXD1Q8NHP7 514 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 PBKQ96KB5 322 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 TRPM5Q9NZQ8 1165 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 ASB3Q9Y575 518 aa10.07□□□□□ -0.8
RIF1-202ENST00000414861 CES2O00748 559 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 RIOK3O14730 519 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 COCHO43405 550 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 GLP2RO95838 553 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 C1RP00736 705 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 OAS1P00973 400 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 FGGP02679 453 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 GJA1P17302 382 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 GABRR2P28476 465 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ARSEP51690 589 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 CYP4F8P98187 520 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ADCY2Q08462 1091 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 STXBP5Q5T5C0 1151 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 CCDC50Q8IVM0 306 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 C12orf76Q8N812 135 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 CMASQ8NFW8 434 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 ZNF707Q96C28 371 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 CARD6Q9BX69 1037 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 PRDM12Q9H4Q4 367 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 MARCH2Q9P0N8 246 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 RASAL2Q9UJF2 1139 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 AP4E1Q9UPM8 1137 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 HELZP42694 1942 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 ZRANB2O95218 330 aaKnown RBP eCLIP10.06□□□□□ -0.87e-13■■■■■ 44.3
RIF1-202ENST00000414861 MYL4P12829 197 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 HOXA9P31269 272 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 GGCXP38435 758 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 CDKN2BP42772 138 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 CDH6P55285 790 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 NTHL1P78549 312 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 WHAMMP3Q1A5X7 153 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 SLC5A9Q2M3M2 681 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 HECTD3Q5T447 861 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ERMARDQ5T6L9 678 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 SEL1L2Q5TEA6 688 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 TXNDC8Q6A555 127 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 SPOCD1Q6ZMY3 1216 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ADAT2Q7Z6V5 191 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 ZDHHC14Q8IZN3 488 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ELMOD1Q8N336 334 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 FCRL2Q96LA5 508 aaPredicted RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 SERPINB11Q96P15 392 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 RNF38Q9H0F5 515 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms