RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 WNT6Q9Y6F9 365 aa18.49■□□□□ 0.55
SBDS-202ENST00000414306 TCRBV5S1A1TA0A578 114 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 TRUB2O95900 331 aaKnown RBP18.48■□□□□ 0.55
SBDS-202ENST00000414306 PSMC3P17980 439 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 GDI1P31150 447 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 RFC1P35251 1148 aaPredicted RBP18.48■□□□□ 0.55
SBDS-202ENST00000414306 SCNN1AP37088 669 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 MATKP42679 507 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 SULT1E1P49888 294 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 GSDMDP57764 484 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 RPL7AP62424 266 aaKnown RBP18.48■□□□□ 0.55
SBDS-202ENST00000414306 TRIM68Q6AZZ1 485 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 DCUN1D2Q6PH85 259 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 RAD9BQ6WBX8 426 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 TMTC1Q8IUR5 882 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 TMEM139Q8IV31 216 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 MFSD6LQ8IWD5 586 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 ZNF276Q8N554 614 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 RXFP2Q8WXD0 754 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 ARHGEF26Q96DR7 871 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 ASIC4Q96FT7 647 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 VCPIP1Q96JH7 1222 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 DDIT4Q9NX09 232 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
SBDS-202ENST00000414306 M0QYT0 321 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 STC2O76061 302 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 FECHP22830 423 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 NOS2P35228 1153 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 GSCP56915 257 aaPredicted RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 ATP11AP98196 1134 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 MAMLD1Q13495 774 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 TDGQ13569 410 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 CDO1Q16878 200 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 C15orf59Q2T9L4 293 aaPredicted RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 OTUD1Q5VV17 481 aaPredicted RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 CC2D1AQ6P1N0 951 aaPredicted RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 TTC8Q8TAM2 541 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 E2F7Q96AV8 911 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 TRIM11Q96F44 468 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 TBCBQ99426 244 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 TRMT61BQ9BVS5 477 aaKnown RBP18.47■□□□□ 0.55
SBDS-202ENST00000414306 TRIM7Q9C029 511 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 PARVAQ9NVD7 372 aa18.47■□□□□ 0.55
SBDS-202ENST00000414306 SIGLEC16A6NMB1 481 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 PDGFRAP16234 1089 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 CORO1AP31146 461 aaKnown RBP18.46■□□□□ 0.55
SBDS-202ENST00000414306 CYLC1P35663 651 aaPredicted RBP18.46■□□□□ 0.55
SBDS-202ENST00000414306 ATXN1P54253 815 aaKnown RBP18.46■□□□□ 0.55
SBDS-202ENST00000414306 TBX4P57082 545 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 GPC5P78333 572 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 COG7P83436 770 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 TNK2Q07912 1038 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 RAB6CQ53S08 254 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 PPP1R15BQ5SWA1 713 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 PLEKHA7Q6IQ23 1121 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 BEND5Q7L4P6 421 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 DDX42Q86XP3 938 aaKnown RBP eCLIP18.46■□□□□ 0.55
SBDS-202ENST00000414306 SERPINB11Q96P15 392 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 RAB6CQ9H0N0 254 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 OBP2AQ9NY56 170 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 STAP1Q9ULZ2 295 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 TFR2Q9UP52 801 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 MYOFQ9NZM1 2061 aa18.46■□□□□ 0.55
SBDS-202ENST00000414306 MUC3AQ02505 3323 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 C2CD4BA6NLJ0 364 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 MOCS2O96007 188 aaPredicted RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 H2AFZP0C0S5 128 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 MYBL1P10243 752 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 GPD1P21695 349 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 SDC4P31431 198 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 TRIP4Q15650 581 aaPredicted RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 SH3PXD2AQ5TCZ1 1133 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 H2AFVQ71UI9 128 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 DENND1CQ8IV53 801 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 BBS7Q8IWZ6 715 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 CCDC170Q8IYT3 715 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 DEPDC1BQ8WUY9 529 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 CTNNBL1Q8WYA6 563 aaPredicted RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 RNF34Q969K3 372 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 NXPE3Q969Y0 559 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 NPY6RQ99463 290 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 DDX23Q9BUQ8 820 aaKnown RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 LINC00597Q9H2U6 94 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 EBF3Q9H4W6 596 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 BRD9Q9H8M2 597 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 THG1LQ9NWX6 298 aaKnown RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 DUS2Q9NX74 493 aaKnown RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 LSM7Q9UK45 103 aaKnown RBP18.45■□□□□ 0.54
SBDS-202ENST00000414306 COL4A3Q01955 1670 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 TRIOO75962 3097 aa18.45■□□□□ 0.54
SBDS-202ENST00000414306 ANKRD62A6NC57 917 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 IRAK2O43187 625 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 NDUFA10O95299 355 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 IGLV3-25P01717 112 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 KLKB1P03952 638 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 ARSAP15289 507 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 IFNAR2P48551 515 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 OGDHQ02218 1023 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 FCHO2Q0JRZ9 810 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms