RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PRMT8Q9NR22 394 aaPredicted RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 VPS18Q9P253 973 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 HMGXB4Q9UGU5 601 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 UBQLN1Q9UMX0 589 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 IGF2RP11717 2491 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 TCRBV7S2A1N4TA0A589 114 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 CARNS1A5YM72 827 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 RECQL4O94761 1208 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 MICAL2O94851 1124 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 TDGF1P13385 188 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 KCNE1P15382 129 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 GABRB2P47870 512 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 COPS2P61201 443 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 SHC2P98077 582 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 PRKCQQ04759 706 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 RNASELQ05823 741 aaKnown RBP17.89■□□□□ 0.45
PTPRC-206ENST00000413409 ZNF252P-AS1Q0IIN9 211 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
PTPRC-206ENST00000413409 DCUN1D2Q6PH85 259 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 GLB1LQ6UWU2 654 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 POLNQ7Z5Q5 900 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 GRK7Q8WTQ7 553 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 COL26A1Q96A83 441 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 ZNF560Q96MR9 790 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 TRAIPQ9BWF2 469 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 NT5C1AQ9BXI3 368 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 TRIM6Q9C030 488 aaPredicted RBP17.89■□□□□ 0.45
PTPRC-206ENST00000413409 NEUROG2Q9H2A3 272 aa17.89■□□□□ 0.45
PTPRC-206ENST00000413409 PIN4Q9Y237 131 aaKnown RBP17.89■□□□□ 0.45
PTPRC-206ENST00000413409 SIGLEC16A6NMB1 481 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 M0QYV0 167 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 ECEL1O95672 775 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 GLUD1P00367 558 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 SETSIPP0DME0 302 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 TARSP26639 723 aaKnown RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 NDST1P52848 882 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 RPL7AP62424 266 aaKnown RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 KLF1Q13351 362 aaPredicted RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 UBXN11Q5T124 520 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 LCLAT1Q6UWP7 414 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 DDX42Q86XP3 938 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 ZMAT2Q96NC0 199 aaKnown RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 ZIM3Q96PE6 472 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 FMO2Q99518 471 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 DPH5Q9H2P9 285 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 NXF3Q9H4D5 531 aaKnown RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 PIDD1Q9HB75 910 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 ZDHHC18Q9NUE0 388 aa17.88■□□□□ 0.45
PTPRC-206ENST00000413409 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
PTPRC-206ENST00000413409 SHISA7A6NL88 538 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 GJB6O95452 261 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 SOD2P04179 222 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 PROS1P07225 676 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 ADH1AP07327 375 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 CYP3A5P20815 502 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 PNPLA4P41247 253 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 MAGEA9P43362 315 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 PSMC1P62191 440 aaKnown RBP17.87■□□□□ 0.45
PTPRC-206ENST00000413409 DMTNQ08495 405 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 PDCLQ13371 301 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 CYP4A22Q5TCH4 519 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 TMC3Q7Z5M5 1100 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 RCOR2Q8IZ40 523 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 TMEM130Q8N3G9 435 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 IPO4Q8TEX9 1081 aaKnown RBP17.87■□□□□ 0.45
PTPRC-206ENST00000413409 MCRS1Q96EZ8 462 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 TXLNGYQ9BZA5 131 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 OSBPL8Q9BZF1 889 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 RXFP1Q9HBX9 757 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 CHST12Q9NRB3 414 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 SEMA4GQ9NTN9 838 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 TUBGCP4Q9UGJ1 667 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 CYTH4Q9UIA0 394 aa17.87■□□□□ 0.45
PTPRC-206ENST00000413409 NRP1O14786 923 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 PPFIA2O75334 1257 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 EFEMP2O95967 443 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 RETP07949 1114 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 GPD2P43304 727 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 OGDHQ02218 1023 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 MTAPQ13126 283 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 C9orf57Q5W0N0 161 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 LAIR1Q6GTX8 287 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 PRR23CQ6ZRP0 262 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 PIK3R5Q8WYR1 880 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 RSPH1Q8WYR4 309 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 CPXM1Q96SM3 734 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 HERC2P3Q9BVR0 1158 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 PRKD2Q9BZL6 878 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 DNAI2Q9GZS0 605 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 MARCH5Q9NX47 278 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 GRHL1Q9NZI5 618 aa17.86■□□□□ 0.45
PTPRC-206ENST00000413409 FEZ2Q9UHY8 353 aaPredicted RBP17.86■□□□□ 0.45
PTPRC-206ENST00000413409 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.86■□□□□ 0.45
PTPRC-206ENST00000413409 KRT1P04264 644 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 ERBB2P04626 1255 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 ALDH2P05091 517 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 URODP06132 367 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms