RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TEX101Q9BY14 249 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 BRD8Q9H0E9 1235 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TP63Q9H3D4 680 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SMOC2Q9H3U7 446 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ZWILCHQ9H900 591 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SEPT11Q9NVA2 429 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PI4KBQ9UBF8 816 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ST6GALNAC2Q9UJ37 374 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CNOT11Q9UKZ1 510 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 DAPP1Q9UN19 280 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TBC1D30Q9Y2I9 924 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 DERAQ9Y315 318 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ZNF711Q9Y462 761 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 DTNAQ9Y4J8 743 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 AQP7P3A6NL99 342 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 H3BNC9 293 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 H7C4K7 107 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 K7ESM1 405 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 GTPBP1O00178 669 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 GJB3O75712 270 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 MLYCDO95822 493 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 GLP2RO95838 553 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 SCGB1D1O95968 90 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 HLA-DOAP06340 250 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 HNRNPCP07910 306 aaKnown RBP eCLIP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 HSPA1AP0DMV8 641 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 HSPA1BP0DMV9 641 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 KLRK1P26718 216 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 ARL3P36405 182 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 TNNT3P45378 269 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 PTDSS1P48651 473 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 SNX16P57768 344 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 RPS7P62081 194 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 MC2RQ01718 297 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 CREB5Q02930 508 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 FPGSQ05932 587 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 MAMLD1Q13495 774 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 DYRK1AQ13627 763 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 RPS6KA2Q15349 733 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 GPR68Q15743 365 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 BTBD16Q32M84 506 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 PLAG1Q6DJT9 500 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF585AQ6P3V2 769 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 TMEM108Q6UXF1 575 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 RAB11FIP2Q7L804 512 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 TMPRSS9Q7Z410 1059 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 IQCA1Q86XH1 822 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 KRT73Q86Y46 540 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 RPAP2Q8IXW5 612 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 DIS3L2Q8IYB7 885 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 STAMQ92783 540 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 CNDP2Q96KP4 475 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 DESI2Q9BSY9 194 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 ITPAQ9BY32 194 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 MRPL9Q9BYD2 267 aaKnown RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 FAM83DQ9H4H8 585 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 SYNCQ9H7C4 482 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 GRPEL1Q9HAV7 217 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 DIAPH3Q9NSV4 1193 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 TMOD4Q9NZQ9 345 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF215Q9UL58 517 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-204ENST00000412061 CAPN11Q9UMQ6 739 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 NOX1Q9Y5S8 564 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 SNX8Q9Y5X2 465 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 PIAS3Q9Y6X2 628 aa4.96□□□□□ -1.62
BRCA1-204ENST00000412061 SOS1Q07889 1333 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SPATA31A3Q5VYP0 1347 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 GTPBP10A4D1E9 387 aaKnown RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 MYADML2A6NDP7 307 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 STX16-NPEPL1H3BU86 382 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 STX16O14662 325 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PCDH17O14917 1159 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CLGNO14967 610 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 MUSKO15146 869 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 RRP9O43818 475 aaKnown RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 COQ9O75208 318 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 NTSR2O95665 410 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PTMAP06454 111 aaKnown RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SRGAP2BP0DMP2 458 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 IL11P20809 199 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 TGM1P22735 817 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 AKT1P31749 480 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PGM1P36871 562 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 NDUFV1P49821 464 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CXADRP78310 365 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 MC1RQ01726 317 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PLP2Q04941 152 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 NSUN2Q08J23 767 aaKnown RBP eCLIP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 LRMPQ12912 555 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CHAF1BQ13112 559 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ACVR2BQ13705 512 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 TOB2Q14106 344 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 HLXQ14774 488 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 NPY5RQ15761 445 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 TBCEQ15813 527 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ASIC2Q16515 512 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SLC5A9Q2M3M2 681 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ZIK1Q3SY52 487 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms