RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 AGAP1Q9UPQ3 857 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF835Q9Y2P0 537 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 WIF1Q9Y5W5 379 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 CHD9Q3L8U1 2897 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 TECTAO75443 2155 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 APOBP04114 4563 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 EYSQ5T1H1 3165 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV2-28A0A075B6P5 120 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A087X002 238 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 UNCXA6NJT0 531 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 PI4K2BG5E9Z4 385 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 J3QRE1 110 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 CDX4O14627 284 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KLF11O14901 512 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 GIPC1O14908 333 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ADAM12O43184 909 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 PCDH7O60245 1069 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 FGF17O60258 216 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DFNA5O60443 496 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KCNH1O95259 989 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 GLUD1P00367 558 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV2D-28P01615 120 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 RHOP08100 348 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 USP17L7P0C7H9 530 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 RNASE2P10153 161 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 RLBP1P12271 317 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ATP6V1B1P15313 513 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 TGM2P21980 687 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 SPRR2EP22531 72 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 WARSP23381 471 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 HSPA4P34932 840 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 GLUD2P49448 558 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF143P52747 638 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 VLDLRP98155 873 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ROR2Q01974 943 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 MAP2K1Q02750 393 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DUSP2Q05923 314 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DOC2AQ14183 400 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 NCAPHQ15003 741 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 SEC23AQ15436 765 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KRTAP6-2Q3LI66 62 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KBTBD12Q3ZCT8 623 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF876PQ49A33 203 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGFL2Q6UWQ7 119 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 SERPINA13PQ6UXR4 307 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 NOTCH2NLQ7Z3S9 236 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 UBE2Q1Q7Z7E8 422 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 PNMA8AQ86V59 439 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KCNMB4Q86W47 210 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 TMEM25Q86YD3 366 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 RASGRP3Q8IV61 690 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 NLGN4XQ8N0W4 816 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DEFB119Q8N690 84 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZSCAN4Q8NAM6 433 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 OR2L2Q8NH16 312 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 LILRB1Q8NHL6 650 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 SH3TC2Q8TF17 1288 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 RIN2Q8WYP3 895 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 C18orf15Q96N68 181 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 MED15Q96RN5 788 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 STACQ99469 402 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 HAUS7Q99871 368 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DCLK3Q9C098 648 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 KLHL25Q9H0H3 589 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 PNNQ9H307 717 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 MOV10Q9HCE1 1003 aaKnown RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF71Q9NQZ8 489 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 CYP26B1Q9NR63 512 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC2A8Q9NY64 477 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF629Q9UEG4 869 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 FZD4Q9ULV1 537 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 STXBP5LQ9Y2K9 1186 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 DMXL2Q8TDJ6 3036 aa-1.26□□□□□ -2.61
RNU4-88P-201ENST00000411220 ABCA1O95477 2261 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TACC2O95359 2948 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A1W2PP11 408 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A1W2PS29 197 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 LILRA5A6NI73 299 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF233A6NK53 670 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC16A3O15427 465 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 NDUFB5O43674 189 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 NXPH3O95157 252 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 CHTF8P0CG12 524 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 IFI30P13284 250 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 SELLP14151 372 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 LMOD1P29536 600 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TIA1P31483 386 aaKnown RBP eCLIP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 G6PCP35575 357 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 HNRNPMP52272 730 aaKnown RBP eCLIP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 RPL24P83731 157 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 FKBP4Q02790 459 aaKnown RBP eCLIP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 CYP4F3Q08477 520 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PDE4CQ08493 712 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PPIDQ08752 370 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 Q0VFX4 171 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 HDAC1Q13547 482 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF174Q15697 407 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRR4Q16378 134 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TCTN1Q2MV58 587 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 LRRFIP1Q32MZ4 808 aaKnown RBP-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms