RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 HLA-CQ95604 372 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 RNF34Q969K3 372 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 TBCBQ99426 244 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 TRIM7Q9C029 511 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 COX16Q9P0S2 106 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 SFMBT1Q9UHJ3 866 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 SALL4Q9UJQ4 1053 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
RN7SKP54-201ENST00000410704 LAMA3Q16787 3333 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLC12A8A0AV02 714 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 USP27XA6NNY8 438 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 H3BQ06 376 aaPredicted RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 MDM4O15151 490 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SPOPO43791 374 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 MOSPD3O75425 235 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 PALMO75781 387 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 TBX18O95935 607 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLC2A3P11169 496 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 CEBPBP17676 345 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 COG7P83436 770 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 ZNF252P-AS1Q0IIN9 211 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 NNTQ13423 1086 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 TRIP4Q15650 581 aaPredicted RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SCYL2Q6P3W7 929 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 DDX42Q86XP3 938 aaKnown RBP eCLIP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 TRIM58Q8NG06 486 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 UBE2Q2Q8WVN8 375 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 NT5C3BQ969T7 300 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 PGAP3Q96FM1 320 aaPredicted RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLC46A2Q9BY10 475 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 HBS1LQ9Y450 684 aaKnown RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 USP15Q9Y4E8 981 aaPredicted RBP10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 TRANK1O15050 2925 aa10.52□□□□□ -0.73
RN7SKP54-201ENST00000410704 GRID2IPA4D2P6 1211 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 IRAK2O43187 625 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 MSI1O43347 362 aaKnown RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PRPSAP2O60256 369 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 ENDOD1O94919 500 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 OLFM2O95897 454 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 IGLV3-25P01717 112 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 APOEP02649 317 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 HMBSP08397 361 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 TFE3P19532 575 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 COMTP21964 271 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CCR1P32246 355 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 GBP2P32456 591 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PCK1P35558 622 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 HARS2P49590 506 aaKnown RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 TBX4P57082 545 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PITX1P78337 314 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLC7A9P82251 487 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 MTA1Q13330 715 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 SMAD4Q13485 552 aaKnown RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CBX2Q14781 532 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 ZNF569Q5MCW4 686 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 BRMS1LQ5PSV4 323 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 STXBP5Q5T5C0 1151 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PEX26Q7Z412 305 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 UNC45BQ8IWX7 931 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CMTM8Q8IZV2 173 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 C17orf53Q8N3J3 647 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 MAFAQ8NHW3 353 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CENPIQ92674 756 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 FGF13Q92913 245 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PLD4Q96BZ4 506 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CYP2S1Q96SQ9 504 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 RNF38Q9H0F5 515 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 WDCPQ9H6R7 721 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 SMPD4Q9NXE4 827 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 GDE1Q9NZC3 331 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CDH22Q9UJ99 828 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 AMFRQ9UKV5 643 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CDH7Q9ULB5 785 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 FAM50BQ9Y247 325 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 CAPN6Q9Y6Q1 641 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 ZFP37Q9Y6Q3 630 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 MYO7AQ13402 2215 aa10.51□□□□□ -0.73
RN7SKP54-201ENST00000410704 PRRC2BQ5JSZ5 2229 aaKnown RBP10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 LRCH4O75427 683 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 KRT7P08729 469 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 IRF1P10914 325 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 MIPP30301 263 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 CXCR3P49682 368 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 AIF1P55008 147 aa10.5□□□□□ -0.73
RN7SKP54-201ENST00000410704 HDAC4P56524 1084 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms