RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SOX4Q06945 474 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CACNB2Q08289 660 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 KRT81Q14533 505 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 STAT4Q14765 748 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 TRIP13Q15645 432 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 TNFAIP8L3Q5GJ75 292 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 KCNT1Q5JUK3 1230 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 LRRC31Q6UY01 552 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 C4orf22Q6V702 233 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 STRADAQ7RTN6 431 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 TREML1Q86YW5 311 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 RFX6Q8HWS3 928 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 RIBC1Q8N443 379 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 ARRDC4Q8NCT1 418 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 RSAD2Q8WXG1 361 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 EDEM1Q92611 657 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CENPTQ96BT3 561 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 ZBTB9Q96C00 473 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CFAP57Q96MR6 1250 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 TSEN34Q9BSV6 310 aaKnown RBP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 CALN1Q9BXU9 219 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 DUSP16Q9BY84 665 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.81□□□□□ -1.16
CXCR4-202ENST00000409817 SLC12A6Q9UHW9 1150 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 GABRQQ9UN88 632 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 NME7Q9Y5B8 376 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
CXCR4-202ENST00000409817 FBXO21O94952 628 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 CHRNA1P02708 482 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 SHBGP04278 402 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 TSHRP16473 764 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PTPN1P18031 435 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 LSP1P33241 339 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 MAGOHP61326 146 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 SP3Q02447 781 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PRKCZQ05513 592 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 GPS1Q13098 491 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 DPYSL3Q14195 570 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 NOMO1Q15155 1222 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 DNAJC21Q5F1R6 531 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 RNASEH2BQ5TBB1 312 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 CCSAPQ6IQ19 270 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 CYP4V2Q6ZWL3 525 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 CENPUQ71F23 418 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 SPATS2Q86XZ4 545 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PPIL6Q8IXY8 311 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 SLC2A14Q8TDB8 520 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 FAM172AQ8WUF8 416 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 HSPH1Q92598 858 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 P3H4Q92791 437 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 HAUS1Q96CS2 278 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 FAF2Q96CS3 445 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PGBD4Q96DM1 585 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 RNF157Q96PX1 679 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PEBP4Q96S96 227 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 RBM15Q96T37 977 aaKnown RBP eCLIP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 TMEM121Q9BTD3 319 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 C11orf84Q9BUA3 381 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 DDX23Q9BUQ8 820 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 FRMD8Q9BZ67 464 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 EPN3Q9H201 632 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 ADAM7Q9H2U9 754 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 DPEP3Q9H4B8 488 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 BCCIPQ9P287 314 aaKnown RBP eCLIP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 RCOR3Q9P2K3 495 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-202ENST00000409817 PTCH2Q9Y6C5 1203 aa7.8□□□□□ -1.16
CXCR4-202ENST00000409817 A0A0U1RQF3 1178 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 TULP2O00295 520 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CDH16O75309 829 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PDGFRBP09619 1106 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 RBP3P10745 1247 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CCDC130P13994 396 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 LMO2P25791 158 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PCSK1P29120 753 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ADORA2BP29275 332 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 HPDP32754 393 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CHKAP35790 457 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MATKP42679 507 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MAGEA4P43358 317 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MMP13P45452 471 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MAPK8P45983 427 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 NR2C2P49116 596 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 VPS41P49754 854 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 AIF1P55008 147 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 EIF3EP60228 445 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ROR1Q01973 937 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 RASA2Q15283 850 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 KCNA10Q16322 511 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PTGISQ16647 500 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 C15orf59Q2T9L4 293 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ERMARDQ5T6L9 678 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SLC9A4Q6AI14 798 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 TRNP1Q6NT89 227 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms