RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 NPC1O15118 1278 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 IRAK2O43187 625 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 ADCY6O43306 1168 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 MTSS1O43312 755 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 THAP12O43422 761 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 NMT2O60551 498 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 ZBED4O75132 1171 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 TFRCP02786 760 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 TOP1P11387 765 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 CYBAP13498 195 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 PI3P19957 117 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 DDCP20711 480 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 CFPP27918 469 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 ADSLP30566 484 aaPredicted RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 SSPNQ14714 243 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 EIF4HQ15056 248 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 PFKFB4Q16877 469 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 IMMTQ16891 758 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 TANGO2Q6ICL3 276 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 SNRNP48Q6IEG0 339 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 CNKSR3Q6P9H4 555 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 CD300LDQ6UXZ3 194 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 MFSD6Q6ZSS7 791 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 CENPQQ7L2Z9 268 aaPredicted RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 PPP1R3BQ86XI6 285 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 TMEM151BQ8IW70 566 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 SDR16C5Q8N3Y7 309 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 RUFY2Q8WXA3 655 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 GFM2Q969S9 779 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 TACO1Q9BSH4 297 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 INO80BQ9C086 356 aaPredicted RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 IL17RBQ9NRM6 502 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 TMEM140Q9NV12 185 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 FLRT1Q9NZU1 646 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.87□□□□□ -1.31
LSM5-203ENST00000409782 FBXO40Q9UH90 709 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 NRBP1Q9UHY1 535 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 DNAI1Q9UI46 699 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 ISY1Q9ULR0 285 aaKnown RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 TMEM98Q9Y2Y6 226 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 CTDP1Q9Y5B0 961 aaPredicted RBP6.87□□□□□ -1.31
LSM5-203ENST00000409782 RPS6KL1Q9Y6S9 549 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 TRIOBPQ9H2D6 2365 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 TMEM232C9JQI7 657 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 F2RL2O00254 374 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 IGFBP6P24592 240 aaPredicted RBP6.86□□□□□ -1.31
LSM5-203ENST00000409782 CCND3P30281 292 aaPredicted RBP6.86□□□□□ -1.31
LSM5-203ENST00000409782 SERPINF1P36955 418 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 RXRGP48443 463 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 PIK3CGP48736 1102 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 PER3P56645 1201 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
LSM5-203ENST00000409782 CCDC96Q2M329 555 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 WDR72Q3MJ13 1102 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 SLC44A4Q53GD3 710 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 KLHDC7AQ5VTJ3 777 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 ZNF783Q6ZMS7 281 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 IQCA1Q86XH1 822 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 FAM26EQ8N5C1 309 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 SH2D3CQ8N5H7 860 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 CHST13Q8NET6 341 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 SNRNP27Q8WVK2 155 aaKnown RBP6.86□□□□□ -1.31
LSM5-203ENST00000409782 UBE2Q2Q8WVN8 375 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 SNX22Q96L94 193 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 TTC14Q96N46 770 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 CLIC6Q96NY7 704 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 ZNF518BQ9C0D4 1074 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 IL25Q9H293 177 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 SMURF2Q9HAU4 748 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 NECTIN3Q9NQS3 549 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 RLIMQ9NVW2 624 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 DACT1Q9NYF0 836 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 GRHPRQ9UBQ7 328 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 FBXO2Q9UK22 296 aaPredicted RBP6.86□□□□□ -1.31
LSM5-203ENST00000409782 SLC39A10Q9ULF5 831 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 PCDHA6Q9UN73 950 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 PCDHA1Q9Y5I3 950 aa6.86□□□□□ -1.31
LSM5-203ENST00000409782 ITIH6Q6UXX5 1313 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 ACKR2O00590 384 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 SEPT4O43236 478 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 CYP7B1O75881 506 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 KNG1P01042 644 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 SNHG28P0DPA3 235 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 PDHBP11177 359 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 MYL4P12829 197 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 ATF2P15336 505 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 MCCP23508 829 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 CHMLP26374 656 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 SOX8P57073 446 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 RPS16P62249 146 aaKnown RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 SP140Q13342 867 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 EFR3AQ14156 821 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 PTK2BQ14289 1009 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms