RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 VANGL2Q9ULK5 521 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 MRPS6P82932 125 aaKnown RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 GPR142Q7Z601 462 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 CREMQ03060 361 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 NT5DC3Q86UY8 548 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 MYO1CO00159 1063 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 SMIM10L2AP0DMW4 78 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 SMIM10L2BP0DMW5 78 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 CHI3L1P36222 383 aaPredicted RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 C11orf63Q6NUN7 778 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF557Q8N988 423 aaPredicted RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 OSGEPQ9NPF4 335 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 ZBTB39O15060 712 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 STX5Q13190 355 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 CASKIN2Q8WXE0 1202 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 PABPC3Q9H361 631 aaKnown RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 GPAMQ9HCL2 828 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 B2RBV5 119 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 SKAP2O75563 359 aaPredicted RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 CENPAP49450 140 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 VSIG10LQ86VR7 867 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 NOA1Q8NC60 698 aaKnown RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 UBP1Q9NZI7 540 aa25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 MORC2Q9Y6X9 1032 aaPredicted RBP25.77■■□□□ 1.72
SPIRE1-202ENST00000409402 EML1O00423 815 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 HSD17B3P37058 310 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 FNDC3BQ53EP0 1204 aaKnown RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 PTAR1Q7Z6K3 402 aaPredicted RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 FAM136AQ96C01 138 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 VCPIP1Q96JH7 1222 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 THUMPD3Q9BV44 507 aaKnown RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 SHCBP1LQ9BZQ2 653 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 DEPDC5O75140 1603 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 EIF3HO15372 352 aaKnown RBP eCLIP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 ADCY6O43306 1168 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 CYP2A6P11509 494 aaPredicted RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 NLRP9Q7RTR0 991 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 ARHGEF19Q8IW93 802 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 SUGP1Q8IWZ8 645 aaKnown RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 ACTRT1Q8TDG2 376 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 TADA1Q96BN2 335 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 GALNTL6Q49A17 601 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 AP1ARQ63HQ0 302 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 CES5AQ6NT32 575 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 ARID3BQ8IVW6 561 aaPredicted RBP25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 C3orf20Q8ND61 904 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 SENP8Q96LD8 212 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 BLOC1S6Q9UL45 172 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 ZW10O43264 779 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 PCNAP12004 261 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 BDNFP23560 247 aa25.76■■□□□ 1.71
SPIRE1-202ENST00000409402 OLFM3Q96PB7 478 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 RFX3P48380 749 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 ERFP50548 548 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 SLC6A3Q01959 620 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 CYTH1Q15438 398 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 PRAMEF19Q5SWL8 479 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 ACOT9Q9Y305 439 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 MPP3Q13368 585 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 CCDC60Q8IWA6 550 aaPredicted RBP25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 DEFB106AQ8N104 65 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 BTN2A2Q8WVV5 523 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 ZBTB45Q96K62 511 aaPredicted RBP25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 TSC22D3Q99576 134 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 HPS4Q9NQG7 708 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 TOMM70O94826 608 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 GUCA1CO95843 209 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 PRLRP16471 622 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 GLRBP48167 497 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 ATXN3P54252 364 aaPredicted RBP25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 WDR18Q9BV38 432 aa25.75■■□□□ 1.71
SPIRE1-202ENST00000409402 PGK1P00558 417 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CCDC130P13994 396 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 MLH1P40692 756 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 SCNN1GP51170 649 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 SLC12A3P55017 1021 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CDH17Q12864 832 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CCDC85BQ15834 202 aaPredicted RBP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CDKAL1Q5VV42 579 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 C10orf53Q8N6V4 93 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 FTHL17Q9BXU8 183 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CTNNAL1Q9UBT7 734 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 LOC100653049A0A140TA62 436 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 KRT34O76011 436 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 TRMT11Q7Z4G4 463 aaKnown RBP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 COPS5Q92905 334 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 POPDC2Q9HBU9 364 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 APPL1Q9UKG1 709 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 PCBP1Q15365 356 aaKnown RBP eCLIP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CYGBQ8WWM9 190 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 RAD54BQ9Y620 910 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 MGAT4DA6NG13 374 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 PTPN3P26045 913 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 HALP42357 657 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 CDH8P55286 799 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 GRAMD4Q6IC98 578 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 SCUBE3Q8IX30 993 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 VGLL2Q8N8G2 317 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms