RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GAP43P17677 238 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 CDH3P22223 829 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 NCOA4Q13772 614 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 SH2D5Q6ZV89 423 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 FRA10AC1Q70Z53 315 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 ZNF564Q8TBZ8 553 aaPredicted RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 PRR11Q96HE9 360 aaPredicted RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 APOPT1Q96IL0 206 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 CNDP2Q96KP4 475 aaKnown RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 KCNK16Q96T55 309 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 DOK1Q99704 481 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 CTRCQ99895 268 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 PSD2Q9BQI7 771 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 HEPHQ9BQS7 1158 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 INTS2Q9H0H0 1204 aaKnown RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 MRPL46Q9H2W6 279 aaKnown RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 DHX33Q9H6R0 707 aaKnown RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 AVENQ9NQS1 362 aaPredicted RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC38A7Q9NVC3 462 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 ATAD3AQ9NVI7 634 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 SELENONQ9NZV5 590 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 EPS15L1Q9UBC2 864 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 DKK3Q9UBP4 350 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 MTMR7Q9Y216 660 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 TDRKHQ9Y2W6 561 aaKnown RBP11□□□□□ -0.65
NIF3L1-204ENST00000409357 RIPK3Q9Y572 518 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 AP4B1Q9Y6B7 739 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 MCM3APO60318 1980 aa11□□□□□ -0.65
NIF3L1-204ENST00000409357 ASTN1O14525 1302 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SDR42E2A6NKP2 422 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 POC1B-GALNT4F8VUJ3 575 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SULT1C4O75897 302 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 IGHA2P01877 340 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 PGK2P07205 417 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 POLR2MP0CAP2 368 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 RBP3P10745 1247 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 TAL1P17542 331 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 NAT1P18440 290 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 ENTPD1P49961 510 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 OVGP1Q12889 678 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 CNGA3Q16281 694 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 ECM1Q16610 540 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 MOGQ16653 247 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 DCAF17Q5H9S7 520 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 GJB7Q6PEY0 223 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 CYP2U1Q7Z449 544 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 TTC7BQ86TV6 843 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC9A9Q8IVB4 645 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SREK1Q8WXA9 508 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 DMAC2Q9NW81 257 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 POMPQ9Y244 141 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 INPP5FQ9Y2H2 1132 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC30A1Q9Y6M5 507 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
NIF3L1-204ENST00000409357 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 POTEMA6NI47 508 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 E7ESA3 106 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 I3L4J1 428 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TXNDC9O14530 226 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 KDM1AO60341 852 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 MGEA5O60502 916 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 OXSR1O95747 527 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 HOXC6P09630 235 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 RAG1P15918 1043 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 NOVP48745 357 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 DLG4P78352 724 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 STX3Q13277 289 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SEPT6Q14141 434 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 C16orf72Q14CZ0 275 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 KCTD19Q17RG1 926 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 HSF5Q4G112 596 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 MOXD1Q6UVY6 613 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 LPCAT2Q7L5N7 544 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PRPF39Q86UA1 669 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 LRRC49Q8IUZ0 686 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PCYOX1LQ8NBM8 494 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TRPV1Q8NER1 839 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TSPAN14Q8NG11 270 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC26A7Q8TE54 656 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TRUB1Q8WWH5 349 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PYDC1Q8WXC3 89 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 DLG3Q92796 817 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 HAS1Q92839 578 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TPK1Q9H3S4 243 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 HMX1Q9NP08 348 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms