RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ELOVL4Q9GZR5 314 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 SDCBP2Q9H190 292 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ANGPTL2Q9UKU9 493 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PSAT1Q9Y617 370 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 LAMB1P07942 1786 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATP6AP2A0A1C7CYW4 349 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATP6AP2O75787 350 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATP5HO75947 161 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 CYP1A1P04798 512 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 GOT1P17174 413 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 NOVP48745 357 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 HSD17B4P51659 736 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PITRM1Q5JRX3 1037 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 RIBC1Q8N443 379 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 NAT16Q8N8M0 369 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATP2A3Q93084 1043 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 SNRNP25Q9BV90 132 aaKnown RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 TRIM8Q9BZR9 551 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 WWP1Q9H0M0 922 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 DPEP3Q9H4B8 488 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 C20orf96Q9NUD7 363 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 PRKAG3Q9UGI9 489 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 FOXD2O60548 495 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 DKC1O60832 514 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNX13-201ENST00000409076 OAS1P00973 400 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 ANPEPP15144 967 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 KCNA2P16389 499 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 GARTP22102 1010 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 CYP2F1P24903 491 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PTGER2P43116 358 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 MOGSQ13724 837 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PDK1Q15118 436 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 TTC39BQ5VTQ0 682 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 SLC26A11Q86WA9 606 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 GDPD5Q8WTR4 605 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 DCAKDQ8WVC6 231 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 C18orf25Q96B23 403 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 WDR83Q9BRX9 315 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 TASP1Q9H6P5 420 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 LIN28AQ9H9Z2 209 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 CPA4Q9UI42 421 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 LNPEPQ9UIQ6 1025 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ARFGEF1Q9Y6D6 1849 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 LDHAP00338 332 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 MT-ND1P03886 318 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 MX2P20592 715 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PSMB4P28070 264 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 AQP4P55087 323 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 YWHAZP63104 245 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 PITX1P78337 314 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 UNC5AQ6ZN44 842 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ASRGL1Q7L266 308 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ARFGAP1Q8N6T3 406 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 OR52K1Q8NGK4 314 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SLC45A3Q96JT2 553 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 TRPV6Q9H1D0 765 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 BATF3Q9NR55 127 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 DDX56Q9NY93 547 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 THEGQ9P2T0 379 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ARHGAP26Q9UNA1 814 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SHOC2Q9UQ13 582 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SMAPO00193 183 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SCAMP3O14828 347 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 OGTO15294 1046 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 GSTT1P30711 240 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 IRF9Q00978 393 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 DSG1Q02413 1049 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ART3Q13508 389 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 TRIM72Q6ZMU5 477 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 CEP128Q6ZU80 1094 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SATL1Q86VE3 508 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 C12orf50Q8NA57 414 aaPredicted RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 PANX3Q96QZ0 392 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 DCUN1D5Q9BTE7 237 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 SLC7A8Q9UHI5 535 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 MTO1Q9Y2Z2 717 aaKnown RBP8.6□□□□□ -1.03
SNX13-201ENST00000409076 ZNF711Q9Y462 761 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 NUP205Q92621 2012 aa8.6□□□□□ -1.03
SNX13-201ENST00000409076 ADM5C9JUS6 153 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 GPR25O00155 361 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 DFFAO00273 331 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 C2CD2LO14523 706 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 MED7O43513 233 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 MYCP01106 439 aaPredicted RBP8.59□□□□□ -1.03
SNX13-201ENST00000409076 RPL10P27635 214 aaKnown RBP8.59□□□□□ -1.03
SNX13-201ENST00000409076 ARL4AP40617 200 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 SLC1A6P48664 564 aa8.59□□□□□ -1.03
SNX13-201ENST00000409076 SULT1E1P49888 294 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms