RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ANKRD44Q8N8A2 993 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 CPEB3Q8NE35 698 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 SUPT20HQ8NEM7 779 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 RFFLQ8WZ73 363 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 GLG1Q92896 1179 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 NACC2Q96BF6 587 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 PGBD1Q96JS3 809 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 HAPLN3Q96S86 360 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 GPR20Q99678 358 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 DPCDQ9BVM2 203 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 DEF6Q9H4E7 631 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 OLA1Q9NTK5 396 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D22BQ9NU19 505 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 KCND3Q9UK17 655 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 AFG3L2Q9Y4W6 797 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 BIVM-ERCC5R4GMW8 1640 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 CC2D2AQ9P2K1 1620 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 A0A087X0M5 115 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 A0A1B0GX30 115 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZAR1LA6NP61 321 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 RNASEH2AO75792 299 aaKnown RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 NDUFA10O95299 355 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 LMNAP02545 664 aaKnown RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 LAG3P18627 525 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 MAGEA10P43363 369 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 PCP4P48539 62 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 TPTEP56180 551 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 RBM6P78332 1123 aaKnown RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 PRKG2Q13237 762 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 BFSP2Q13515 415 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 TOB2Q14106 344 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 KCNJ12Q14500 433 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 ERICH6BQ5W0A0 696 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 ANO7Q6IWH7 933 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 PIK3AP1Q6ZUJ8 805 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 LRRC8DQ7L1W4 858 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D1Q86TI0 1168 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 SLC2A12Q8TD20 617 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 NOC3LQ8WTT2 800 aaKnown RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 ST8SIA4Q92187 359 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 FKBP10Q96AY3 582 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 KTI12Q96EK9 354 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 C7orf26Q96N11 449 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 SSBP3Q9BWW4 388 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 TEX101Q9BY14 249 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 ABHD16BQ9H3Z7 469 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 KCNK9Q9NPC2 374 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 DNAJC16Q9Y2G8 782 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 RABGAP1Q9Y3P9 1069 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 VPS8Q8N3P4 1428 aa5.31□□□□□ -1.56
HMGB3P18-201ENST00000406327 TTBK1Q5TCY1 1321 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 VWA3AA6NCI4 1184 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 OTOL1A6NHN0 477 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 PROM1O43490 865 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMPRSS11DO60235 418 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMEM63AO94886 807 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBX18O95935 607 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 ITGB3P05106 788 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 HNRNPA1P09651 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZNF37AP17032 561 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 ADRA1DP25100 572 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 THBS4P35443 961 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 PGM1P36871 562 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 PBX1P40424 430 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 GUCY1B3Q02153 619 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 RNASELQ05823 741 aaKnown RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBL3Q12788 808 aaKnown RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 MTAPQ13126 283 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 FHL3Q13643 280 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 GPR68Q15743 365 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 AASDHQ4L235 1098 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 FAM90A2PQ658T7 463 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 UCMAQ8WVF2 138 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 PTCD3Q96EY7 689 aaKnown RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 MYEOVQ96EZ4 313 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 CINPQ9BW66 212 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 OSBPL5Q9H0X9 879 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 XYLT2Q9H1B5 865 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 NRDE2Q9H7Z3 1164 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 SNX15Q9NRS6 342 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 MAP3K2Q9Y2U5 619 aa5.3□□□□□ -1.56
HMGB3P18-201ENST00000406327 ERICH3Q5RHP9 1530 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3DA0A087WVF3 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3IA0A087WXS9 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3EA0A087X179 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3KA0A087X1G2 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ANKRD18BA2A2Z9 1011 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3BA6NDS4 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3FA6NER0 549 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms