RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PSMD11O00231 422 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 FOXN3O00409 490 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 APRTP07741 180 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ASNSP08243 561 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 C6orf222P0C671 652 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 DDX5P17844 614 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ATF4P18848 351 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 FUT4P22083 530 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 RPA1P27694 616 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 SLC1A1P43005 524 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ENTPD1P49961 510 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 NLRP11P59045 1033 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 TUBA3CQ13748 450 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 EDRF1Q3B7T1 1238 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 TKFCQ3LXA3 575 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 CEP78Q5JTW2 689 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ARMC4Q5T2S8 1044 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 FAM102BQ5T8I3 360 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 TTC39BQ5VTQ0 682 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 PDPK2PQ6A1A2 396 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ALYREFQ86V81 257 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 SYTL1Q8IYJ3 562 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 PQLC1Q8N2U9 271 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 GTF3C2Q8WUA4 911 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 NCLNQ969V3 563 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 DCUN1D1Q96GG9 259 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 NSMCE3Q96MG7 304 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 CSRNP1Q96S65 589 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 DGCR6LQ9BY27 220 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 NMUR2Q9GZQ4 415 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 JMJD4Q9H9V9 463 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 EXOSC4Q9NPD3 245 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 SUN2Q9UH99 717 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 GNEQ9Y223 722 aaKnown RBP6.04□□□□□ -1.44
HDAC9-203ENST00000406072 SIK3Q9Y2K2 1263 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 KLHL20Q9Y2M5 609 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
HDAC9-203ENST00000406072 RPTORQ8N122 1335 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 GTPBP10A4D1E9 387 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 F5H423 210 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ZMPSTE24O75844 475 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CCNKO75909 580 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 TM7SF2O76062 418 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PRLP01236 227 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ALOX5P09917 674 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ME2P23368 584 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PSMA2P25787 234 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PON1P27169 355 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SSTR1P30872 391 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PTGS2P35354 604 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CSE1LP55060 971 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 AP3B2Q13367 1082 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PPP6R3Q5H9R7 873 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 C6orf52Q5T4I8 152 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 GALNT18Q6P9A2 607 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 KLHL35Q6PF15 583 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 FBXO36Q8NEA4 188 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 C6orf62Q9GZU0 229 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 TDRD3Q9H7E2 651 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CLK4Q9HAZ1 481 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 AS3MTQ9HBK9 375 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 IARS2Q9NSE4 1012 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SEL1LQ9UBV2 794 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SLC9A2Q9UBY0 812 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 TUBGCP4Q9UGJ1 667 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 KCNH4Q9UQ05 1017 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PCDHA1Q9Y5I3 950 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 BAZ2BQ9UIF8 2168 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ABCB11O95342 1321 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 EMSYQ7Z589 1322 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SIP14410 1827 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CARNS1A5YM72 827 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 C2orf71A6NGG8 1288 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PTGES3LE9PB15 166 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PDXKO00764 312 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CLASP2O75122 1294 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 USP12O75317 370 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 PIAS1O75925 651 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 TDP2O95551 362 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CYP3A4P08684 503 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 GSTT2P0CG29 244 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 GSTT2BP0CG30 244 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 FMO5P49326 533 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 COPZ1P61923 177 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CENPCQ03188 943 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 EVX2Q03828 476 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF280DQ6N043 979 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 POTEGQ6S5H5 508 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 CYP2R1Q6VVX0 501 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 IRF2BP1Q8IU81 584 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 ERI1Q8IV48 349 aaKnown RBP6.03□□□□□ -1.44
HDAC9-203ENST00000406072 FNDC8Q8TC99 324 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SCFD1Q8WVM8 642 aa6.03□□□□□ -1.44
HDAC9-203ENST00000406072 SEPT1Q8WYJ6 367 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms