RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 KLC4Q9NSK0 619 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 TMOD4Q9NZQ9 345 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 VPS51Q9UID3 782 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 DAPP1Q9UN19 280 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 ENTPD2Q9Y5L3 495 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 RAD54BQ9Y620 910 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A18PA6NE21 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A16PA6NEW6 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A9PA6NNJ1 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A5PA8MXJ8 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 F5H697 171 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TIMM44O43615 452 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A15PP0C7V4 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM90A14PP0C7W9 464 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 ATP1A3P13637 1013 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 WT1P19544 449 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 KRT9P35527 623 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 LILRA4P59901 499 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 NHLH1Q02575 133 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 UBE3AQ05086 875 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 CHRNDQ07001 517 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 MYO1EQ12965 1108 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 FHL3Q13643 280 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 COLEC12Q5KU26 742 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TTC22Q5TAA0 569 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 ATPAF1Q5TC12 328 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 CACHD1Q5VU97 1274 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 ABLIM2Q6H8Q1 611 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 KRBA2Q6ZNG9 492 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TSPYL6Q8N831 410 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TOR1AIP2Q8NFQ8 470 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 CAGE1Q8TC20 777 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZBTB10Q96DT7 871 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 PBKQ96KB5 322 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TWNKQ96RR1 684 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 KLK15Q9H2R5 256 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 TAF1DQ9H5J8 278 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 EPS8L2Q9H6S3 715 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 G6PC2Q9NQR9 355 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 BLOC1S4Q9NUP1 217 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 DKK3Q9UBP4 350 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 SSX2IPQ9Y2D8 614 aa5.6□□□□□ -1.51
HMGB1P13-201ENST00000406019 LINC00473A8K010 186 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 CD3EAPO15446 510 aaKnown RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 TRIAP1O43715 76 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 DDX58O95786 925 aaKnown RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 VIPP01282 170 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 CHRM2P08172 466 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ITGALP20701 1170 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 KLRK1P26718 216 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 CD6P30203 668 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 PXNP49023 591 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 AARSP49588 968 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 CDK7P50613 346 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 SP2Q02086 613 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 KRT17Q04695 432 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ERCC6LQ2NKX8 1250 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 GPATCH4Q5T3I0 446 aaKnown RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 L1TD1Q5T7N2 865 aaKnown RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 MAP3K21Q5TCX8 1036 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 STRIP1Q5VSL9 837 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 KAZNQ674X7 775 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 NFRKBQ6P4R8 1299 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 TMEM108Q6UXF1 575 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 DSTYKQ6XUX3 929 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 RAB11FIP2Q7L804 512 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 BOLLQ8N9W6 283 aaKnown RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 B3GALNT2Q8NCR0 500 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAM136AQ96C01 138 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZNF668Q96K58 619 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 COG8Q96MW5 612 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 UROC1Q96N76 676 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 TRAPPC9Q96Q05 1148 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 NUDT22Q9BRQ3 303 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ACTRT3Q9BYD9 372 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 VPS16Q9H269 839 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 FSCN3Q9NQT6 498 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 TBC1D22BQ9NU19 505 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 SLC17A6Q9P2U8 582 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ARPP21Q9UBL0 812 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 ADAM21Q9UKJ8 722 aa5.59□□□□□ -1.51
HMGB1P13-201ENST00000406019 POLR2AP24928 1970 aaKnown RBP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 CCDC151A5D8V7 595 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 LRRC3CA6NJW4 275 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 CCNT2O60583 730 aaKnown RBP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 RASAL1O95294 804 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 TBX18O95935 607 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 IGLV2-14P01704 120 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PDHA1P08559 390 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PPIFP30405 207 aaKnown RBP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PROK1P58294 105 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 SATB1Q01826 763 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 GPS1Q13098 491 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 MAPK7Q13164 816 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 GRM4Q14833 912 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PTCHD3Q3KNS1 767 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 RD3Q7Z3Z2 195 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 CSGALNACT1Q8TDX6 532 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms