RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 LHX6Q9UPM6 363 aa18.92■□□□□ 0.62
HDAC11-204ENST00000404040 SH3BP1Q9Y3L3 701 aa18.92■□□□□ 0.62
HDAC11-204ENST00000404040 CABIN1Q9Y6J0 2220 aa18.92■□□□□ 0.62
HDAC11-204ENST00000404040 IGHV1OR15-9A0A0B4J2B8 117 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 A0A1W2PQF6 199 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 FAM221BA6H8Z2 402 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 LRRIQ3A6PVS8 624 aaPredicted RBP18.91■□□□□ 0.62
HDAC11-204ENST00000404040 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 CST3P01034 146 aaPredicted RBP18.91■□□□□ 0.62
HDAC11-204ENST00000404040 FAM193AP78312 1265 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 MYL5Q02045 173 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 ZNF33AQ06730 810 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 HECTD3Q5T447 861 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 SNX30Q5VWJ9 437 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 LRSAM1Q6UWE0 723 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 C11orf57Q6ZUT1 292 aaPredicted RBP18.91■□□□□ 0.62
HDAC11-204ENST00000404040 MIB1Q86YT6 1006 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 DEFB119Q8N690 84 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 ANP32EQ9BTT0 268 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 CCSER2Q9H7U1 834 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 SPHK2Q9NRA0 654 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
HDAC11-204ENST00000404040 TP53BP1Q12888 1972 aaPredicted RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 A8MXQ7 604 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 PHACTR2O75167 634 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 STAU1O95793 577 aaKnown RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 NTSR1P30989 418 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 SLC5A3P53794 718 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 BIRC3Q13489 604 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 TRPC3Q13507 836 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 ZNF423Q2M1K9 1284 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 DCAF17Q5H9S7 520 aaPredicted RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 TCERG1LQ5VWI1 586 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 EGFLAMQ63HQ2 1017 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 RAB44Q7Z6P3 723 aaPredicted RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 FAM35AQ86V20 835 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 TMEM25Q86YD3 366 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 SLC41A1Q8IVJ1 513 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 OR2I1PQ8NGU4 316 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 SCAMP5Q8TAC9 235 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 KCNK16Q96T55 309 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 XYLT2Q9H1B5 865 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 TMEM8AQ9HCN3 771 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 CD248Q9HCU0 757 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 DNAAF2Q9NVR5 837 aaKnown RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 GMIPQ9P107 970 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 STARD13Q9Y3M8 1113 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 NFE2L3Q9Y4A8 694 aa18.9■□□□□ 0.62
HDAC11-204ENST00000404040 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
HDAC11-204ENST00000404040 ARHGAP33O14559 1287 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 TRIM24O15164 1050 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 ZDHHC11BP0C7U3 371 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 CD59P13987 128 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 NDUFV2P19404 249 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.61
HDAC11-204ENST00000404040 WASP42768 502 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 ZNF165P49910 485 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 CETN1Q12798 172 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 HNRNPDQ14103 355 aaKnown RBP18.89■□□□□ 0.61
HDAC11-204ENST00000404040 ANO4Q32M45 955 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 KRT39Q6A163 491 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 NUDT18Q6ZVK8 323 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 CHCHD4Q8N4Q1 142 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 WBP2Q969T9 261 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 HSPA12BQ96MM6 686 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 MED15Q96RN5 788 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
HDAC11-204ENST00000404040 DMAP1Q9NPF5 467 aaPredicted RBP18.89■□□□□ 0.61
HDAC11-204ENST00000404040 IL37Q9NZH6 218 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.89■□□□□ 0.61
HDAC11-204ENST00000404040 LOC400499M0QZD8 3231 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 CELSR3Q9NYQ7 3312 aa18.89■□□□□ 0.61
HDAC11-204ENST00000404040 TMEM131Q92545 1883 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 FAM92AA1XBS5 289 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 BECN2A8MW95 431 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 CACNG3O60359 315 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 ZNF217O75362 1048 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
HDAC11-204ENST00000404040 TPM2P07951 284 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 IRF1P10914 325 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 EEF1GP26641 437 aaKnown RBP18.88■□□□□ 0.61
HDAC11-204ENST00000404040 ATICP31939 592 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 MYL6P60660 151 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 TPM4P67936 248 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 DLG4P78352 724 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 ZACNQ401N2 412 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 GRAMD4Q6IC98 578 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 PROSER1Q86XN7 944 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 CCDC150Q8NCX0 1101 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 SMARCD1Q96GM5 515 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 SMYD3Q9H7B4 428 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 DNAJC17Q9NVM6 304 aaKnown RBP18.88■□□□□ 0.61
HDAC11-204ENST00000404040 NXF1Q9UBU9 619 aaKnown RBP18.88■□□□□ 0.61
HDAC11-204ENST00000404040 CHORDC1Q9UHD1 332 aaPredicted RBP18.88■□□□□ 0.61
HDAC11-204ENST00000404040 CYP8B1Q9UNU6 501 aa18.88■□□□□ 0.61
HDAC11-204ENST00000404040 TAF4O00268 1085 aa18.87■□□□□ 0.61
HDAC11-204ENST00000404040 P4HA2O15460 535 aa18.87■□□□□ 0.61
HDAC11-204ENST00000404040 CAPNS1P04632 268 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms