RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	B3GAT3	O94766	335 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LYPLA2	O95372	231 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FUCA1	P04066	466 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RET	P07949	1114 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RHO	P08100	348 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CD72	P21854	359 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GLRA2	P23416	452 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TACR1	P25103	407 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	OR1D2	P34982	312 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	BCL6	P41182	706 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	EVC	P57679	992 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	IRX6	P78412	446 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SPIRE1	Q08AE8	756 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PRPF4B	Q13523	1007 aa	Known RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MAPK6	Q16659	721 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRIM61	Q5EBN2	209 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CYP4A22	Q5TCH4	519 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	C1orf228	Q6PIY5	440 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TSSK4	Q6SA08	328 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PDZD4	Q76G19	769 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CDR2L	Q86X02	465 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	IRF2BP1	Q8IU81	584 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461		Q8N1Y9	231 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GSTCD	Q8NEC7	633 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DEPTOR	Q8TB45	409 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ING5	Q8WYH8	240 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF274	Q96GC6	653 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	UROC1	Q96N76	676 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRMT61B	Q9BVS5	477 aa	Known RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	BRD9	Q9H8M2	597 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZFP14	Q9HCL3	533 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	XPNPEP1	Q9NQW7	623 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FAM53C	Q9NYF3	392 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MARCH2	Q9P0N8	246 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	WRAP73	Q9P2S5	460 aa	Predicted RBP	7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRAF6	Q9Y4K3	522 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CYP46A1	Q9Y6A2	500 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CDY1	Q9Y6F8	540 aa		7.38	□□□□□ -1.23
CEACAM1-208	ENST00000403461		H7BY64	318 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RECQL4	O94761	1208 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLITRK3	O94933	977 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ASMTL	O95671	621 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ADRB1	P08588	477 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CNR2	P34972	360 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ARL2	P36404	184 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RARRES1	P49788	294 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MTAP	Q13126	283 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SIM2	Q14190	667 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LRRC32	Q14392	662 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TCEA2	Q15560	299 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CALCRL	Q16602	461 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DCAF4L1	Q3SXM0	396 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ADGRF1	Q5T601	910 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF648	Q5T619	568 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	BICRAL	Q6AI39	1079 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	IL31	Q6EBC2	164 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MPZL3	Q6UWV2	235 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CEP68	Q76N32	757 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RUFY3	Q7L099	469 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LEMD2	Q8NC56	503 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DEPDC1B	Q8WUY9	529 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FAM3C	Q92520	227 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NELL1	Q92832	810 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HAS1	Q92839	578 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ELSPBP1	Q96BH3	223 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MCRS1	Q96EZ8	462 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRMT2B	Q96GJ1	504 aa	Known RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LIN37	Q96GY3	246 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MSANTD3	Q96H12	275 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	EIF2AK1	Q9BQI3	630 aa	Known RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HEBP1	Q9NRV9	189 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TOPORS	Q9NS56	1045 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HCFC1R1	Q9NWW0	138 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DNMT3B	Q9UBC3	853 aa	Known RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MTRR	Q9UBK8	725 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FBLN5	Q9UBX5	448 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FBXL7	Q9UJT9	491 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NDRG2	Q9UN36	371 aa	Known RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PCDHA12	Q9UN75	941 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	KCNJ14	Q9UNX9	436 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461		X6R8D5	127 aa		7.37	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GPR179	Q6PRD1	2367 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	OR14I1	A6ND48	311 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	C22orf46	C9J442	243 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461		H7C4K7	107 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TMEM189-UBE2V1	I3L0A0	370 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PTGES	O14684	152 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLC30A4	O14863	429 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PPP1R12A	O14974	1030 aa	Predicted RBP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ADAM12	O43184	909 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MPO	P05164	745 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PRKCB	P05771	671 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GLI4	P10075	376 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	XRCC6	P12956	609 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PTPN2	P17706	415 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms