RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 BSNQ9UPA5 3926 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 HHLA1C9JL84 531 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CBX4O00257 560 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PLK4O00444 970 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FLRT2O43155 660 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 AP1G2O75843 785 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CER1O95813 267 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CCDC130P13994 396 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CASP4P49662 377 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FYB2Q5VWT5 728 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SV2BQ7L1I2 683 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ZNF843Q8N446 348 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 XPO6Q96QU8 1125 aaKnown RBP12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CGRRF1Q99675 332 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CDC6Q99741 560 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 WDR35Q9P2L0 1181 aa12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NXF1Q9UBU9 619 aaKnown RBP12.56□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FLNCQ14315 2725 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 H0Y8X5 98 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 H3BQV1 296 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ATXN7O15265 892 aaPredicted RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CYP26A1O43174 497 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 STAU1O95793 577 aaKnown RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PENKP01210 267 aaPredicted RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ACSL1P33121 698 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 IL9RQ01113 521 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ZNF234Q14588 700 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PSMD6Q15008 389 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CCDC157Q569K6 752 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FAM173BQ6P4H8 233 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 EPM2AIP1Q7L775 607 aaPredicted RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FAM124AQ86V42 546 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CCDC127Q96BQ5 260 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 DMAP1Q9NPF5 467 aaPredicted RBP12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PLXNA2O75051 1894 aa12.55□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CLIC2O15247 247 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TNFSF14O43557 240 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 STC2O76061 302 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 VNN1O95497 513 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 HLA-EP13747 358 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ABCG1P45844 678 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TNNC1P63316 161 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ALCAMQ13740 583 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SURF1Q15526 300 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PRAMEF14Q5SWL7 426 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SCARA5Q6ZMJ2 495 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ACOT1Q86TX2 421 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 AGPAT3Q9NRZ7 376 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 R3HCC1Q9Y3T6 440 aaKnown RBP12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
SPTLC1P3-201ENST00000403408 A0A1W2PQH9 124 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 BMP15O95972 392 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 C7P10643 843 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TNNI1P19237 187 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CTSKP43235 329 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SHBQ15464 509 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 IL27RAQ6UWB1 636 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SMARCD1Q96GM5 515 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NACA2Q9H009 215 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 VRTNQ9H8Y1 702 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SCML2Q9UQR0 700 aa12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.53□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TK2O00142 265 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GABBR2O75899 941 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms