RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SYCP2LQ5T4T6 812 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 PGM2L1Q6PCE3 622 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 CEP120Q8N960 986 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 ACMSDQ8TDX5 336 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 NCSTNQ92542 709 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 CLPTM1LQ96KA5 538 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 EMCNQ9ULC0 261 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 PRPSAP2O60256 369 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 CIB2O75838 187 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SRGAP2CP0DJJ0 459 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 PDGFRAP16234 1089 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 TCF7P36402 384 aaPredicted RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 STX3Q13277 289 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 TRMT10BQ6PF06 316 aaKnown RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 METTL7BQ6UX53 244 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 FAM183BPQ6ZVS7 135 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 SLC13A1Q9BZW2 595 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 CDT1Q9H211 546 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
FAM47DP-201ENST00000402340 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 NFICP08651 508 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 RAB27AP51159 221 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 ORC1Q13415 861 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 EEF1DP3Q658K8 133 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 THTPAQ9BU02 230 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 NFKBIZQ9BYH8 718 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 MIS12Q9H081 205 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 NDE1Q9NXR1 346 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 ZBED1O96006 694 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 APRTP07741 180 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 CXCL8P10145 99 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 BCAR1P56945 870 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 KDSRQ06136 332 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 CDC16Q13042 620 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 SEMA5AQ13591 1074 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 TEDDM1Q5T9Z0 273 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 DCAF15Q66K64 600 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 XAB2Q9HCS7 855 aaKnown RBP12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 KIAA1257Q9ULG3 409 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 B4GALT5O43286 388 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 METTL18O95568 372 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 MPP5Q8N3R9 675 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 PCMTD2Q9NV79 361 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 STK32BQ9NY57 414 aa12.89□□□□□ -0.35
FAM47DP-201ENST00000402340 PRKCGP05129 697 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 ALDH18A1P54886 795 aaKnown RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 KRT81Q14533 505 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 FAXCQ5TGI0 409 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 RNF111Q6ZNA4 994 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 PLPPR4Q7Z2D5 763 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 CDKL3Q8IVW4 592 aaPredicted RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 ZNF195O14628 629 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 KLHL2O95198 593 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 MYL4P12829 197 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 XIAPP98170 497 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 DNAJC28Q9NX36 388 aa12.88□□□□□ -0.35
FAM47DP-201ENST00000402340 CCDC195A0A1B0GUA6 201 aa12.87□□□□□ -0.35
FAM47DP-201ENST00000402340 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
FAM47DP-201ENST00000402340 ITGB3P05106 788 aa12.87□□□□□ -0.35
FAM47DP-201ENST00000402340 KRT19P08727 400 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms